Protein–RNA interactions for Protein: E9Q0B4

Cdr1, Cerebellar degeneration-related antigen 1, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdr1E9Q0B4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdr1E9Q0B4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Cdr1E9Q0B4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdr1E9Q0B4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Cdr1E9Q0B4 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdr1E9Q0B4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Cdr1E9Q0B4 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdr1E9Q0B4 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdr1E9Q0B4 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.92■□□□□ 0.78
Cdr1E9Q0B4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cdr1E9Q0B4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdr1E9Q0B4 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdr1E9Q0B4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Cdr1E9Q0B4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.92■□□□□ 0.78
Cdr1E9Q0B4 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cdr1E9Q0B4 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.92■□□□□ 0.78
Cdr1E9Q0B4 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.92■□□□□ 0.78
Cdr1E9Q0B4 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdr1E9Q0B4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cdr1E9Q0B4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
Cdr1E9Q0B4 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdr1E9Q0B4 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Cdr1E9Q0B4 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdr1E9Q0B4 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Cdr1E9Q0B4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Cdr1E9Q0B4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdr1E9Q0B4 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Cdr1E9Q0B4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdr1E9Q0B4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cdr1E9Q0B4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdr1E9Q0B4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cdr1E9Q0B4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdr1E9Q0B4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdr1E9Q0B4 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdr1E9Q0B4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdr1E9Q0B4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cdr1E9Q0B4 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdr1E9Q0B4 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdr1E9Q0B4 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cdr1E9Q0B4 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cdr1E9Q0B4 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdr1E9Q0B4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdr1E9Q0B4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.89■□□□□ 0.77
Cdr1E9Q0B4 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.89■□□□□ 0.77
Cdr1E9Q0B4 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.89■□□□□ 0.77
Cdr1E9Q0B4 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdr1E9Q0B4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.88■□□□□ 0.77
Cdr1E9Q0B4 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdr1E9Q0B4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdr1E9Q0B4 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.88■□□□□ 0.77
Cdr1E9Q0B4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdr1E9Q0B4 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Cdr1E9Q0B4 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Cdr1E9Q0B4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdr1E9Q0B4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdr1E9Q0B4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Cdr1E9Q0B4 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.88■□□□□ 0.77
Cdr1E9Q0B4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdr1E9Q0B4 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cdr1E9Q0B4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdr1E9Q0B4 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdr1E9Q0B4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.87■□□□□ 0.77
Cdr1E9Q0B4 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cdr1E9Q0B4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdr1E9Q0B4 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdr1E9Q0B4 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdr1E9Q0B4 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.87■□□□□ 0.77
Cdr1E9Q0B4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdr1E9Q0B4 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Cdr1E9Q0B4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
Cdr1E9Q0B4 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdr1E9Q0B4 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cdr1E9Q0B4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cdr1E9Q0B4 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Cdr1E9Q0B4 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.86■□□□□ 0.77
Cdr1E9Q0B4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.85■□□□□ 0.77
Cdr1E9Q0B4 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdr1E9Q0B4 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.85■□□□□ 0.77
Cdr1E9Q0B4 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Cdr1E9Q0B4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdr1E9Q0B4 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdr1E9Q0B4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdr1E9Q0B4 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Cdr1E9Q0B4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdr1E9Q0B4 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Cdr1E9Q0B4 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdr1E9Q0B4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdr1E9Q0B4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdr1E9Q0B4 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
Cdr1E9Q0B4 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdr1E9Q0B4 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.84■□□□□ 0.77
Cdr1E9Q0B4 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cdr1E9Q0B4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Cdr1E9Q0B4 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cdr1E9Q0B4 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Cdr1E9Q0B4 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
Cdr1E9Q0B4 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cdr1E9Q0B4 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.83■□□□□ 0.77
Cdr1E9Q0B4 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cdr1E9Q0B4 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms