Protein–RNA interactions for Protein: A0A140T8Q0

Igkv3-3, Immunoglobulin kappa variable 3-3 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-3A0A140T8Q0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv3-3A0A140T8Q0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv3-3A0A140T8Q0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Igkv3-3A0A140T8Q0 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Igkv3-3A0A140T8Q0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv3-3A0A140T8Q0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Igkv3-3A0A140T8Q0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC12.19□□□□□ -0.46
Igkv3-3A0A140T8Q0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv3-3A0A140T8Q0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv3-3A0A140T8Q0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv3-3A0A140T8Q0 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv3-3A0A140T8Q0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Igkv3-3A0A140T8Q0 Gm45364-201ENSMUST00000210883 159 ntBASIC12.19□□□□□ -0.46
Igkv3-3A0A140T8Q0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC12.19□□□□□ -0.46
Igkv3-3A0A140T8Q0 Gm15043-201ENSMUST00000118843 1543 ntBASIC12.19□□□□□ -0.46
Igkv3-3A0A140T8Q0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv3-3A0A140T8Q0 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Igkv3-3A0A140T8Q0 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv3-3A0A140T8Q0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Igkv3-3A0A140T8Q0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Igkv3-3A0A140T8Q0 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Igkv3-3A0A140T8Q0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC12.19□□□□□ -0.46
Igkv3-3A0A140T8Q0 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Igkv3-3A0A140T8Q0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv3-3A0A140T8Q0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Igkv3-3A0A140T8Q0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv3-3A0A140T8Q0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv3-3A0A140T8Q0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Igkv3-3A0A140T8Q0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Igkv3-3A0A140T8Q0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC12.18□□□□□ -0.46
Igkv3-3A0A140T8Q0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Igkv3-3A0A140T8Q0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-3A0A140T8Q0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-3A0A140T8Q0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-3A0A140T8Q0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-3A0A140T8Q0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-3A0A140T8Q0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Igkv3-3A0A140T8Q0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-3A0A140T8Q0 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-3A0A140T8Q0 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Igkv3-3A0A140T8Q0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Igkv3-3A0A140T8Q0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-3A0A140T8Q0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Igkv3-3A0A140T8Q0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-3A0A140T8Q0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-3A0A140T8Q0 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-3A0A140T8Q0 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Igkv3-3A0A140T8Q0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv3-3A0A140T8Q0 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Igkv3-3A0A140T8Q0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv3-3A0A140T8Q0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv3-3A0A140T8Q0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv3-3A0A140T8Q0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv3-3A0A140T8Q0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Igkv3-3A0A140T8Q0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv3-3A0A140T8Q0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Igkv3-3A0A140T8Q0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv3-3A0A140T8Q0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC12.16□□□□□ -0.46
Igkv3-3A0A140T8Q0 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Igkv3-3A0A140T8Q0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Igkv3-3A0A140T8Q0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv3-3A0A140T8Q0 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv3-3A0A140T8Q0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC12.15□□□□□ -0.46
Igkv3-3A0A140T8Q0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv3-3A0A140T8Q0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv3-3A0A140T8Q0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv3-3A0A140T8Q0 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv3-3A0A140T8Q0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC12.15□□□□□ -0.46
Igkv3-3A0A140T8Q0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv3-3A0A140T8Q0 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Igkv3-3A0A140T8Q0 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Igkv3-3A0A140T8Q0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv3-3A0A140T8Q0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Igkv3-3A0A140T8Q0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Igkv3-3A0A140T8Q0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv3-3A0A140T8Q0 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Igkv3-3A0A140T8Q0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Igkv3-3A0A140T8Q0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv3-3A0A140T8Q0 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv3-3A0A140T8Q0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv3-3A0A140T8Q0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv3-3A0A140T8Q0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv3-3A0A140T8Q0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv3-3A0A140T8Q0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv3-3A0A140T8Q0 Gm43403-201ENSMUST00000198011 1786 ntBASIC12.14□□□□□ -0.47
Igkv3-3A0A140T8Q0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv3-3A0A140T8Q0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Igkv3-3A0A140T8Q0 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv3-3A0A140T8Q0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Igkv3-3A0A140T8Q0 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv3-3A0A140T8Q0 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv3-3A0A140T8Q0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv3-3A0A140T8Q0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv3-3A0A140T8Q0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv3-3A0A140T8Q0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC12.13□□□□□ -0.47
Igkv3-3A0A140T8Q0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Igkv3-3A0A140T8Q0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Igkv3-3A0A140T8Q0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC12.13□□□□□ -0.47
Igkv3-3A0A140T8Q0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Igkv3-3A0A140T8Q0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms