Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh17Q9R100 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Cdh17Q9R100 n-R5s64-201ENSMUST00000102019 119 ntBASIC10.89□□□□□ -0.67
Cdh17Q9R100 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Gm15528-201ENSMUST00000117821 864 ntBASIC10.89□□□□□ -0.67
Cdh17Q9R100 Gm15808-201ENSMUST00000119046 604 ntBASIC10.89□□□□□ -0.67
Cdh17Q9R100 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Gm44270-201ENSMUST00000203084 1234 ntBASIC10.89□□□□□ -0.67
Cdh17Q9R100 CT573034.1-201ENSMUST00000222983 313 ntBASIC10.89□□□□□ -0.67
Cdh17Q9R100 AC154171.1-201ENSMUST00000224610 643 ntBASIC10.89□□□□□ -0.67
Cdh17Q9R100 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh17Q9R100 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh17Q9R100 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC10.89□□□□□ -0.67
Cdh17Q9R100 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdh17Q9R100 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh17Q9R100 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Cdh17Q9R100 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh17Q9R100 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Cdh17Q9R100 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh17Q9R100 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh17Q9R100 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh17Q9R100 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC10.88□□□□□ -0.67
Cdh17Q9R100 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh17Q9R100 Mir680-2-201ENSMUST00000102163 110 ntBASIC10.88□□□□□ -0.67
Cdh17Q9R100 Gm23251-201ENSMUST00000103773 110 ntBASIC10.88□□□□□ -0.67
Cdh17Q9R100 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh17Q9R100 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh17Q9R100 Gm6506-201ENSMUST00000119775 1136 ntBASIC10.88□□□□□ -0.67
Cdh17Q9R100 Gm3765-201ENSMUST00000130985 1447 ntBASIC10.88□□□□□ -0.67
Cdh17Q9R100 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC10.88□□□□□ -0.67
Cdh17Q9R100 Gm25492-201ENSMUST00000157383 129 ntBASIC10.88□□□□□ -0.67
Cdh17Q9R100 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC10.88□□□□□ -0.67
Cdh17Q9R100 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh17Q9R100 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC10.88□□□□□ -0.67
Cdh17Q9R100 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC10.88□□□□□ -0.67
Cdh17Q9R100 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC10.88□□□□□ -0.67
Cdh17Q9R100 Gm37246-201ENSMUST00000192665 835 ntBASIC10.88□□□□□ -0.67
Cdh17Q9R100 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Cdh17Q9R100 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC10.88□□□□□ -0.67
Cdh17Q9R100 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.88□□□□□ -0.67
Cdh17Q9R100 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh17Q9R100 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh17Q9R100 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Cdh17Q9R100 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Cdh17Q9R100 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Cdh17Q9R100 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh17Q9R100 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh17Q9R100 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh17Q9R100 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.88□□□□□ -0.67
Cdh17Q9R100 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh17Q9R100 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Cdh17Q9R100 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh17Q9R100 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh17Q9R100 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdh17Q9R100 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.88□□□□□ -0.67
Cdh17Q9R100 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdh17Q9R100 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms