Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Itga10-201ENSMUST00000029744 5044 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Slco5a1-207ENSMUST00000188454 8463 ntAPPRIS P2 TSL 5 BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Arhgap21-208ENSMUST00000141298 6339 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Gm43807-201ENSMUST00000200678 1781 ntBASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Gm8565-201ENSMUST00000183259 1014 ntBASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 AC113031.8-201ENSMUST00000227856 631 ntBASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Clasp2-203ENSMUST00000166734 4108 ntAPPRIS P3 TSL 5 BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Adamts6-201ENSMUST00000065766 4822 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Pdpr-201ENSMUST00000039333 4938 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Serpinc1-201ENSMUST00000064725 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC9.2□□□□□ -0.94
Smco3Q8BQM7 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Pogk-206ENSMUST00000169324 7034 ntAPPRIS ALT2 TSL 3 BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Trio-210ENSMUST00000227337 6375 ntBASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Cdk12-201ENSMUST00000003203 4837 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC9.2□□□□□ -0.94
Smco3Q8BQM7 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC9.2□□□□□ -0.94
Smco3Q8BQM7 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Ralgps1-204ENSMUST00000113165 6192 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Gm10463-202ENSMUST00000195772 2889 ntBASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Utp15-201ENSMUST00000040972 4120 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Setd7-201ENSMUST00000037141 7411 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Gm11531-201ENSMUST00000117614 555 ntBASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Gm3329-201ENSMUST00000159873 556 ntBASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Gm27731-201ENSMUST00000185192 107 ntBASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Gm2553-201ENSMUST00000215986 605 ntBASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Zfp462-201ENSMUST00000030131 4823 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Itgam-207ENSMUST00000098015 4803 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Smco3Q8BQM7 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms