Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Chd4Q6PDQ2 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 Bcl2-202ENSMUST00000189999 2841 ntBASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 Gm23255-201ENSMUST00000102244 110 ntBASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 Gm12009-201ENSMUST00000121361 1100 ntBASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 Gm13688-201ENSMUST00000121557 608 ntBASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 Gm6439-201ENSMUST00000199849 862 ntBASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chd4Q6PDQ2 Gm45165-201ENSMUST00000207763 1631 ntBASIC14.37□□□□□ -0.11
Chd4Q6PDQ2 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC14.37□□□□□ -0.11
Chd4Q6PDQ2 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC14.37□□□□□ -0.11
Chd4Q6PDQ2 AC124732.3-201ENSMUST00000221835 1765 ntBASIC14.37□□□□□ -0.11
Chd4Q6PDQ2 Gm5395-201ENSMUST00000121650 915 ntBASIC14.37□□□□□ -0.11
Chd4Q6PDQ2 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chd4Q6PDQ2 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chd4Q6PDQ2 Gm17796-201ENSMUST00000189015 1213 ntBASIC14.37□□□□□ -0.11
Chd4Q6PDQ2 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Chd4Q6PDQ2 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chd4Q6PDQ2 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Chd4Q6PDQ2 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Chd4Q6PDQ2 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chd4Q6PDQ2 Gm43051-201ENSMUST00000201096 2678 ntBASIC14.37□□□□□ -0.11
Chd4Q6PDQ2 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chd4Q6PDQ2 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC14.37□□□□□ -0.11
Chd4Q6PDQ2 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chd4Q6PDQ2 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chd4Q6PDQ2 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chd4Q6PDQ2 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chd4Q6PDQ2 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chd4Q6PDQ2 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chd4Q6PDQ2 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC14.37□□□□□ -0.11
Chd4Q6PDQ2 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Chd4Q6PDQ2 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chd4Q6PDQ2 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC14.37□□□□□ -0.11
Chd4Q6PDQ2 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chd4Q6PDQ2 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chd4Q6PDQ2 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chd4Q6PDQ2 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chd4Q6PDQ2 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC14.36□□□□□ -0.11
Chd4Q6PDQ2 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chd4Q6PDQ2 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Chd4Q6PDQ2 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chd4Q6PDQ2 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chd4Q6PDQ2 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chd4Q6PDQ2 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chd4Q6PDQ2 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Chd4Q6PDQ2 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chd4Q6PDQ2 Gm24294-201ENSMUST00000158295 277 ntBASIC14.36□□□□□ -0.11
Chd4Q6PDQ2 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chd4Q6PDQ2 Zcwpw2-203ENSMUST00000187803 372 ntBASIC14.36□□□□□ -0.11
Chd4Q6PDQ2 Gm29543-201ENSMUST00000188138 967 ntBASIC14.36□□□□□ -0.11
Chd4Q6PDQ2 Gm9515-201ENSMUST00000200276 647 ntBASIC14.36□□□□□ -0.11
Chd4Q6PDQ2 Gm43811-201ENSMUST00000202862 695 ntBASIC14.36□□□□□ -0.11
Chd4Q6PDQ2 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Chd4Q6PDQ2 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chd4Q6PDQ2 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chd4Q6PDQ2 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chd4Q6PDQ2 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Chd4Q6PDQ2 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chd4Q6PDQ2 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chd4Q6PDQ2 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.36□□□□□ -0.11
Chd4Q6PDQ2 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chd4Q6PDQ2 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chd4Q6PDQ2 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chd4Q6PDQ2 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chd4Q6PDQ2 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chd4Q6PDQ2 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chd4Q6PDQ2 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Chd4Q6PDQ2 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chd4Q6PDQ2 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms