Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 GALP-202ENST00000440823 889 ntTSL 5 BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 RN7SL288P-201ENST00000490496 291 ntBASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 HNRNPA1P56-201ENST00000505767 954 ntBASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 RBM4-207ENST00000506523 654 ntTSL 3 BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 AL512310.5-201ENST00000551999 515 ntBASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 AC005777.1-201ENST00000588332 187 ntBASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LYSMD4Q5XG99 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 AC018529.2-202ENST00000611482 3087 ntBASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 AC004554.1-201ENST00000422830 1468 ntBASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 RPL13AP3-202ENST00000494676 1473 ntBASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 AMT-256ENST00000638063 1783 ntTSL 5 BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 ABCD1P4-201ENST00000399687 604 ntBASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 HNRNPA1P58-201ENST00000403629 610 ntBASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 TBC1D27-202ENST00000424239 1573 ntBASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 RPL3P5-201ENST00000441645 1232 ntBASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 AL451000.1-201ENST00000451300 1186 ntBASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 AC025186.1-201ENST00000478174 870 ntBASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 AC132825.4-202ENST00000578792 434 ntBASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 NAV1-210ENST00000593583 726 ntBASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 DGAT2L7P-201ENST00000602462 744 ntBASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 MIR6074-201ENST00000612054 107 ntBASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 MME-218ENST00000625667 363 ntTSL 5 BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 AL354702.1-201ENST00000442006 1960 ntBASIC13.94□□□□□ -0.18
LYSMD4Q5XG99 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms