Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Gm9826-201ENSMUST00000029124 1299 ntBASIC10.5□□□□□ -0.73
IghmP01872 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
IghmP01872 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
IghmP01872 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
IghmP01872 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
IghmP01872 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
IghmP01872 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
IghmP01872 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
IghmP01872 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
IghmP01872 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC10.5□□□□□ -0.73
IghmP01872 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
IghmP01872 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
IghmP01872 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC10.5□□□□□ -0.73
IghmP01872 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
IghmP01872 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
IghmP01872 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
IghmP01872 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
IghmP01872 Gm3765-201ENSMUST00000130985 1447 ntBASIC10.5□□□□□ -0.73
IghmP01872 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
IghmP01872 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
IghmP01872 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
IghmP01872 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
IghmP01872 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.49□□□□□ -0.73
IghmP01872 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
IghmP01872 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.49□□□□□ -0.73
IghmP01872 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
IghmP01872 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
IghmP01872 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
IghmP01872 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
IghmP01872 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
IghmP01872 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
IghmP01872 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
IghmP01872 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.49□□□□□ -0.73
IghmP01872 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
IghmP01872 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
IghmP01872 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
IghmP01872 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
IghmP01872 Gm45165-201ENSMUST00000207763 1631 ntBASIC10.49□□□□□ -0.73
IghmP01872 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
IghmP01872 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC10.49□□□□□ -0.73
IghmP01872 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC10.49□□□□□ -0.73
IghmP01872 Gm7666-201ENSMUST00000146631 819 ntBASIC10.49□□□□□ -0.73
IghmP01872 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
IghmP01872 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
IghmP01872 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC10.49□□□□□ -0.73
IghmP01872 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
IghmP01872 Gm10774-201ENSMUST00000188689 204 ntBASIC10.49□□□□□ -0.73
IghmP01872 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC10.49□□□□□ -0.73
IghmP01872 Gm37284-201ENSMUST00000193607 539 ntBASIC10.49□□□□□ -0.73
IghmP01872 Gm37981-201ENSMUST00000194280 535 ntBASIC10.49□□□□□ -0.73
IghmP01872 Gm43852-201ENSMUST00000202098 917 ntBASIC10.49□□□□□ -0.73
IghmP01872 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
IghmP01872 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
IghmP01872 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC10.49□□□□□ -0.73
IghmP01872 Gm1821-202ENSMUST00000227415 750 ntBASIC10.49□□□□□ -0.73
IghmP01872 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
IghmP01872 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.49□□□□□ -0.73
IghmP01872 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
IghmP01872 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
IghmP01872 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
IghmP01872 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
IghmP01872 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
IghmP01872 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.49□□□□□ -0.73
IghmP01872 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.49□□□□□ -0.73
IghmP01872 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
IghmP01872 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
IghmP01872 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
IghmP01872 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
IghmP01872 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
IghmP01872 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
IghmP01872 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
IghmP01872 AC166836.1-201ENSMUST00000219933 1795 ntBASIC10.49□□□□□ -0.73
IghmP01872 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
IghmP01872 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
IghmP01872 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
IghmP01872 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
IghmP01872 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.49□□□□□ -0.73
IghmP01872 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
IghmP01872 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
IghmP01872 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC10.49□□□□□ -0.73
IghmP01872 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
IghmP01872 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
IghmP01872 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC10.49□□□□□ -0.73
IghmP01872 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
IghmP01872 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC10.48□□□□□ -0.73
IghmP01872 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
IghmP01872 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
IghmP01872 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
IghmP01872 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
IghmP01872 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
IghmP01872 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
IghmP01872 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.48□□□□□ -0.73
IghmP01872 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
IghmP01872 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
IghmP01872 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
IghmP01872 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
IghmP01872 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
IghmP01872 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC10.48□□□□□ -0.73
IghmP01872 Gm21358-201ENSMUST00000191645 1659 ntBASIC10.48□□□□□ -0.73
IghmP01872 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms