Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clip4Q8CI96 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clip4Q8CI96 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clip4Q8CI96 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.35□□□□□ -0.59
Clip4Q8CI96 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Clip4Q8CI96 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Clip4Q8CI96 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.35□□□□□ -0.59
Clip4Q8CI96 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Clip4Q8CI96 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clip4Q8CI96 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Clip4Q8CI96 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Clip4Q8CI96 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clip4Q8CI96 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clip4Q8CI96 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Clip4Q8CI96 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Clip4Q8CI96 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clip4Q8CI96 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Clip4Q8CI96 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Clip4Q8CI96 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clip4Q8CI96 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clip4Q8CI96 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Clip4Q8CI96 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clip4Q8CI96 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clip4Q8CI96 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Clip4Q8CI96 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Clip4Q8CI96 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clip4Q8CI96 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clip4Q8CI96 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Clip4Q8CI96 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.34□□□□□ -0.59
Clip4Q8CI96 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clip4Q8CI96 Gm14193-201ENSMUST00000105067 153 ntBASIC11.34□□□□□ -0.59
Clip4Q8CI96 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Clip4Q8CI96 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clip4Q8CI96 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.34□□□□□ -0.59
Clip4Q8CI96 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.34□□□□□ -0.59
Clip4Q8CI96 Gm11960-201ENSMUST00000122068 925 ntBASIC11.34□□□□□ -0.59
Clip4Q8CI96 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Clip4Q8CI96 Gm5523-201ENSMUST00000180415 997 ntBASIC11.34□□□□□ -0.59
Clip4Q8CI96 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.34□□□□□ -0.59
Clip4Q8CI96 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Clip4Q8CI96 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.34□□□□□ -0.59
Clip4Q8CI96 Gm45113-201ENSMUST00000207518 165 ntBASIC11.34□□□□□ -0.59
Clip4Q8CI96 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Clip4Q8CI96 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.34□□□□□ -0.59
Clip4Q8CI96 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.34□□□□□ -0.59
Clip4Q8CI96 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Clip4Q8CI96 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.34□□□□□ -0.59
Clip4Q8CI96 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Clip4Q8CI96 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Clip4Q8CI96 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Clip4Q8CI96 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Clip4Q8CI96 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Clip4Q8CI96 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clip4Q8CI96 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Clip4Q8CI96 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Clip4Q8CI96 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clip4Q8CI96 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.34□□□□□ -0.59
Clip4Q8CI96 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.34□□□□□ -0.59
Clip4Q8CI96 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clip4Q8CI96 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Clip4Q8CI96 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Clip4Q8CI96 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Clip4Q8CI96 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clip4Q8CI96 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clip4Q8CI96 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clip4Q8CI96 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Clip4Q8CI96 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Clip4Q8CI96 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clip4Q8CI96 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clip4Q8CI96 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clip4Q8CI96 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clip4Q8CI96 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Clip4Q8CI96 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Clip4Q8CI96 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Clip4Q8CI96 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Clip4Q8CI96 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Clip4Q8CI96 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Clip4Q8CI96 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Clip4Q8CI96 Gm12616-201ENSMUST00000118594 382 ntBASIC11.33□□□□□ -0.6
Clip4Q8CI96 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.33□□□□□ -0.6
Clip4Q8CI96 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.33□□□□□ -0.6
Clip4Q8CI96 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Clip4Q8CI96 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Clip4Q8CI96 Gm22144-201ENSMUST00000157402 102 ntBASIC11.33□□□□□ -0.6
Clip4Q8CI96 Gm22334-201ENSMUST00000158070 133 ntBASIC11.33□□□□□ -0.6
Clip4Q8CI96 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Clip4Q8CI96 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.33□□□□□ -0.6
Clip4Q8CI96 Gm12624-201ENSMUST00000177615 382 ntBASIC11.33□□□□□ -0.6
Clip4Q8CI96 Gm12621-201ENSMUST00000177760 382 ntBASIC11.33□□□□□ -0.6
Clip4Q8CI96 Gm12615-201ENSMUST00000177970 382 ntBASIC11.33□□□□□ -0.6
Clip4Q8CI96 Gm12622-201ENSMUST00000177975 382 ntBASIC11.33□□□□□ -0.6
Clip4Q8CI96 Gm12627-201ENSMUST00000178412 382 ntBASIC11.33□□□□□ -0.6
Clip4Q8CI96 Gm12625-201ENSMUST00000179122 382 ntBASIC11.33□□□□□ -0.6
Clip4Q8CI96 Gm12614-201ENSMUST00000179586 382 ntBASIC11.33□□□□□ -0.6
Clip4Q8CI96 Gm12613-201ENSMUST00000180323 382 ntBASIC11.33□□□□□ -0.6
Clip4Q8CI96 Mir6546-201ENSMUST00000184460 62 ntBASIC11.33□□□□□ -0.6
Clip4Q8CI96 Gm9540-201ENSMUST00000188230 478 ntBASIC11.33□□□□□ -0.6
Clip4Q8CI96 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.33□□□□□ -0.6
Clip4Q8CI96 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.33□□□□□ -0.6
Clip4Q8CI96 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms