Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim35Q8C006 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 AC120153.1-201ENSMUST00000226502 1311 ntBASIC12.97□□□□□ -0.33
Trim35Q8C006 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim35Q8C006 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Gm23653-201ENSMUST00000116751 97 ntBASIC12.97□□□□□ -0.33
Trim35Q8C006 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.97□□□□□ -0.33
Trim35Q8C006 Gm12368-201ENSMUST00000122251 434 ntBASIC12.97□□□□□ -0.33
Trim35Q8C006 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Mrgpra3-201ENSMUST00000176369 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.97□□□□□ -0.33
Trim35Q8C006 Gm21241-201ENSMUST00000179551 934 ntBASIC12.97□□□□□ -0.33
Trim35Q8C006 Gm29649-201ENSMUST00000185649 419 ntBASIC12.97□□□□□ -0.33
Trim35Q8C006 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trim35Q8C006 Gm28802-201ENSMUST00000188624 944 ntBASIC12.97□□□□□ -0.33
Trim35Q8C006 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.97□□□□□ -0.33
Trim35Q8C006 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC12.97□□□□□ -0.33
Trim35Q8C006 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Trim35Q8C006 Gm8956-201ENSMUST00000203939 825 ntBASIC12.97□□□□□ -0.33
Trim35Q8C006 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.97□□□□□ -0.33
Trim35Q8C006 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.97□□□□□ -0.33
Trim35Q8C006 AC192088.2-201ENSMUST00000227590 411 ntBASIC12.97□□□□□ -0.33
Trim35Q8C006 Eif3m-201ENSMUST00000028592 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trim35Q8C006 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trim35Q8C006 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trim35Q8C006 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Ralyl-201ENSMUST00000108372 1980 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Gm43258-201ENSMUST00000200312 1950 ntBASIC12.97□□□□□ -0.33
Trim35Q8C006 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim35Q8C006 Zcchc9-201ENSMUST00000022121 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 AC154841.1-201ENSMUST00000227263 1479 ntBASIC12.97□□□□□ -0.33
Trim35Q8C006 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim35Q8C006 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim35Q8C006 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim35Q8C006 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Trim35Q8C006 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim35Q8C006 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim35Q8C006 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim35Q8C006 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC12.96□□□□□ -0.33
Trim35Q8C006 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim35Q8C006 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim35Q8C006 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim35Q8C006 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Trim35Q8C006 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Trim35Q8C006 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim35Q8C006 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim35Q8C006 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim35Q8C006 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim35Q8C006 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim35Q8C006 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim35Q8C006 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim35Q8C006 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim35Q8C006 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim35Q8C006 Gm15004-201ENSMUST00000119192 630 ntBASIC12.96□□□□□ -0.33
Trim35Q8C006 Gm12103-201ENSMUST00000121892 362 ntBASIC12.96□□□□□ -0.33
Trim35Q8C006 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim35Q8C006 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.96□□□□□ -0.33
Trim35Q8C006 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim35Q8C006 Gm11959-201ENSMUST00000148655 723 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim35Q8C006 Gm24768-201ENSMUST00000158512 94 ntBASIC12.96□□□□□ -0.33
Trim35Q8C006 Proscos-202ENSMUST00000178990 666 ntBASIC12.96□□□□□ -0.33
Trim35Q8C006 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim35Q8C006 Gm27905-201ENSMUST00000184005 207 ntBASIC12.96□□□□□ -0.33
Trim35Q8C006 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC12.96□□□□□ -0.33
Trim35Q8C006 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim35Q8C006 Gm44266-201ENSMUST00000205235 500 ntBASIC12.96□□□□□ -0.33
Trim35Q8C006 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trim35Q8C006 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trim35Q8C006 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trim35Q8C006 Gm5917-201ENSMUST00000217638 721 ntBASIC12.96□□□□□ -0.33
Trim35Q8C006 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim35Q8C006 AC132384.5-201ENSMUST00000218562 226 ntBASIC12.96□□□□□ -0.33
Trim35Q8C006 AC154283.1-201ENSMUST00000228417 389 ntBASIC12.96□□□□□ -0.33
Trim35Q8C006 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim35Q8C006 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim35Q8C006 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim35Q8C006 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms