Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm13204-201ENSMUST00000120110 821 ntBASIC14.11□□□□□ -0.15
Nkx2-3P97334 Gm12136-201ENSMUST00000120460 1209 ntBASIC14.11□□□□□ -0.15
Nkx2-3P97334 Gm8152-201ENSMUST00000120842 637 ntBASIC14.11□□□□□ -0.15
Nkx2-3P97334 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-3P97334 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nkx2-3P97334 Gm25604-201ENSMUST00000158359 133 ntBASIC14.11□□□□□ -0.15
Nkx2-3P97334 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-3P97334 Gm26119-201ENSMUST00000175601 104 ntBASIC14.11□□□□□ -0.15
Nkx2-3P97334 Gm43564-201ENSMUST00000196185 211 ntBASIC14.11□□□□□ -0.15
Nkx2-3P97334 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-3P97334 Gm8170-201ENSMUST00000218581 945 ntBASIC14.11□□□□□ -0.15
Nkx2-3P97334 CT030195.2-201ENSMUST00000226074 1286 ntBASIC14.11□□□□□ -0.15
Nkx2-3P97334 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-3P97334 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-3P97334 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-3P97334 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-3P97334 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-3P97334 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-3P97334 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC14.11□□□□□ -0.15
Nkx2-3P97334 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nkx2-3P97334 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-3P97334 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-3P97334 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-3P97334 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-3P97334 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.11□□□□□ -0.15
Nkx2-3P97334 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-3P97334 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Gm42858-201ENSMUST00000202512 1704 ntBASIC14.1□□□□□ -0.15
Nkx2-3P97334 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-3P97334 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Gm16459-201ENSMUST00000121443 686 ntBASIC14.1□□□□□ -0.15
Nkx2-3P97334 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Gm13827-201ENSMUST00000148801 372 ntBASIC14.1□□□□□ -0.15
Nkx2-3P97334 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC14.1□□□□□ -0.15
Nkx2-3P97334 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Gm25872-201ENSMUST00000177784 100 ntBASIC14.1□□□□□ -0.15
Nkx2-3P97334 Gm7928-201ENSMUST00000181249 701 ntBASIC14.1□□□□□ -0.15
Nkx2-3P97334 Gm6606-201ENSMUST00000193613 947 ntBASIC14.1□□□□□ -0.15
Nkx2-3P97334 Trav11n-201ENSMUST00000200113 343 ntBASIC14.1□□□□□ -0.15
Nkx2-3P97334 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC14.1□□□□□ -0.15
Nkx2-3P97334 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC14.1□□□□□ -0.15
Nkx2-3P97334 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-3P97334 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Gm8894-201ENSMUST00000074642 666 ntBASIC14.1□□□□□ -0.15
Nkx2-3P97334 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Gm43931-201ENSMUST00000204817 2870 ntBASIC14.1□□□□□ -0.15
Nkx2-3P97334 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Nkx2-3P97334 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC14.1□□□□□ -0.15
Nkx2-3P97334 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.09□□□□□ -0.15
Nkx2-3P97334 Gm42970-201ENSMUST00000196407 1352 ntBASIC14.09□□□□□ -0.15
Nkx2-3P97334 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-3P97334 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-3P97334 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-3P97334 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-3P97334 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-3P97334 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-3P97334 AC153380.1-201ENSMUST00000214959 2364 ntBASIC14.09□□□□□ -0.15
Nkx2-3P97334 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC14.09□□□□□ -0.15
Nkx2-3P97334 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-3P97334 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-3P97334 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-3P97334 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-3P97334 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-3P97334 Gm1826-201ENSMUST00000118646 1162 ntBASIC14.09□□□□□ -0.15
Nkx2-3P97334 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx2-3P97334 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms