Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
VCPP55072 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.49■□□□□ 0.07
VCPP55072 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VCPP55072 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
VCPP55072 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
VCPP55072 RPS9P1-201ENST00000419943 583 ntBASIC15.49■□□□□ 0.07
VCPP55072 AC073150.1-201ENST00000450406 1084 ntBASIC15.49■□□□□ 0.07
VCPP55072 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VCPP55072 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC15.49■□□□□ 0.07
VCPP55072 IGHV3-37-201ENST00000518544 340 ntBASIC15.49■□□□□ 0.07
VCPP55072 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VCPP55072 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VCPP55072 MIR4754-201ENST00000582477 89 ntBASIC15.49■□□□□ 0.07
VCPP55072 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC15.49■□□□□ 0.07
VCPP55072 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC15.49■□□□□ 0.07
VCPP55072 RNF146-211ENST00000609447 607 ntTSL 4 BASIC15.49■□□□□ 0.07
VCPP55072 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC15.49■□□□□ 0.07
VCPP55072 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC15.49■□□□□ 0.07
VCPP55072 AC068587.8-201ENST00000641239 219 ntBASIC15.49■□□□□ 0.07
VCPP55072 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VCPP55072 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VCPP55072 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VCPP55072 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.49■□□□□ 0.07
VCPP55072 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
VCPP55072 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
VCPP55072 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
VCPP55072 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VCPP55072 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
VCPP55072 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
VCPP55072 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VCPP55072 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
VCPP55072 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
VCPP55072 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
VCPP55072 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
VCPP55072 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
VCPP55072 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
VCPP55072 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VCPP55072 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
VCPP55072 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VCPP55072 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.48■□□□□ 0.07
VCPP55072 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.48■□□□□ 0.07
VCPP55072 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VCPP55072 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VCPP55072 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VCPP55072 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.48■□□□□ 0.07
VCPP55072 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VCPP55072 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
VCPP55072 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
VCPP55072 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
VCPP55072 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
VCPP55072 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
VCPP55072 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
VCPP55072 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VCPP55072 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.48■□□□□ 0.07
VCPP55072 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VCPP55072 RPL7P35-201ENST00000446943 740 ntBASIC15.48■□□□□ 0.07
VCPP55072 AC079112.1-201ENST00000454972 939 ntBASIC15.48■□□□□ 0.07
VCPP55072 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.48■□□□□ 0.07
VCPP55072 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC15.48■□□□□ 0.07
VCPP55072 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC15.48■□□□□ 0.07
VCPP55072 AC090857.1-201ENST00000527400 390 ntBASIC15.48■□□□□ 0.07
VCPP55072 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC15.48■□□□□ 0.07
VCPP55072 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC15.48■□□□□ 0.07
VCPP55072 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.48■□□□□ 0.07
VCPP55072 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC15.48■□□□□ 0.07
VCPP55072 AC242376.2-201ENST00000619355 883 ntBASIC15.48■□□□□ 0.07
VCPP55072 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VCPP55072 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
VCPP55072 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VCPP55072 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
VCPP55072 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
VCPP55072 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.48■□□□□ 0.07
VCPP55072 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
VCPP55072 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VCPP55072 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
VCPP55072 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VCPP55072 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
VCPP55072 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VCPP55072 AC074138.1-201ENST00000611182 1303 ntBASIC15.47■□□□□ 0.07
VCPP55072 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VCPP55072 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VCPP55072 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VCPP55072 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VCPP55072 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VCPP55072 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.47■□□□□ 0.07
VCPP55072 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VCPP55072 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
VCPP55072 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.47■□□□□ 0.07
VCPP55072 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VCPP55072 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC15.47■□□□□ 0.07
VCPP55072 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
VCPP55072 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VCPP55072 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
VCPP55072 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
VCPP55072 AL627231.1-201ENST00000394467 1125 ntBASIC15.47■□□□□ 0.07
VCPP55072 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
VCPP55072 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
VCPP55072 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
VCPP55072 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC15.47■□□□□ 0.07
VCPP55072 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms