Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 CU062626.3-201ENSMUST00000225522 1411 ntBASIC10.59□□□□□ -0.71
Sox6P40645 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox6P40645 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox6P40645 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox6P40645 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox6P40645 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox6P40645 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Sox6P40645 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox6P40645 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Sox6P40645 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox6P40645 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox6P40645 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox6P40645 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC10.59□□□□□ -0.71
Sox6P40645 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox6P40645 Gm11509-201ENSMUST00000117358 325 ntBASIC10.59□□□□□ -0.71
Sox6P40645 Gm12857-201ENSMUST00000117678 592 ntBASIC10.59□□□□□ -0.71
Sox6P40645 Gm11700-201ENSMUST00000119409 403 ntBASIC10.59□□□□□ -0.71
Sox6P40645 Gm12196-201ENSMUST00000120954 262 ntBASIC10.59□□□□□ -0.71
Sox6P40645 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Sox6P40645 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.59□□□□□ -0.71
Sox6P40645 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC10.59□□□□□ -0.71
Sox6P40645 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.59□□□□□ -0.71
Sox6P40645 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox6P40645 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox6P40645 AC159747.1-201ENSMUST00000219903 265 ntBASIC10.59□□□□□ -0.71
Sox6P40645 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.59□□□□□ -0.71
Sox6P40645 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC10.59□□□□□ -0.71
Sox6P40645 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox6P40645 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Sox6P40645 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox6P40645 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox6P40645 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox6P40645 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Sox6P40645 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox6P40645 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox6P40645 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox6P40645 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox6P40645 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox6P40645 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.59□□□□□ -0.71
Sox6P40645 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox6P40645 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox6P40645 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Sox6P40645 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Sox6P40645 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox6P40645 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC10.59□□□□□ -0.71
Sox6P40645 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Sox6P40645 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.58□□□□□ -0.71
Sox6P40645 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Sox6P40645 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Sox6P40645 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC10.58□□□□□ -0.72
Sox6P40645 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.58□□□□□ -0.72
Sox6P40645 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC10.58□□□□□ -0.72
Sox6P40645 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.58□□□□□ -0.72
Sox6P40645 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Sox6P40645 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Sox6P40645 Gm12501-201ENSMUST00000119163 529 ntBASIC10.58□□□□□ -0.72
Sox6P40645 Gm6039-201ENSMUST00000121667 1250 ntBASIC10.58□□□□□ -0.72
Sox6P40645 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 Gm25881-201ENSMUST00000157783 103 ntBASIC10.58□□□□□ -0.72
Sox6P40645 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Sox6P40645 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.58□□□□□ -0.72
Sox6P40645 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.58□□□□□ -0.72
Sox6P40645 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.58□□□□□ -0.72
Sox6P40645 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Sox6P40645 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 Gm44826-201ENSMUST00000207648 2332 ntBASIC10.58□□□□□ -0.72
Sox6P40645 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.58□□□□□ -0.72
Sox6P40645 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.58□□□□□ -0.72
Sox6P40645 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Sox6P40645 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Sox6P40645 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC10.58□□□□□ -0.72
Sox6P40645 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms