Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Nedd8P29595 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC10.3□□□□□ -0.76
Nedd8P29595 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Nedd8P29595 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nedd8P29595 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nedd8P29595 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nedd8P29595 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nedd8P29595 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nedd8P29595 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nedd8P29595 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Nedd8P29595 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC10.3□□□□□ -0.76
Nedd8P29595 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Nedd8P29595 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nedd8P29595 Gm3372-201ENSMUST00000198806 1792 ntBASIC10.3□□□□□ -0.76
Nedd8P29595 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.3□□□□□ -0.76
Nedd8P29595 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Nedd8P29595 Acer2-202ENSMUST00000084433 4060 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nedd8P29595 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nedd8P29595 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.3□□□□□ -0.76
Nedd8P29595 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nedd8P29595 Gm13297-201ENSMUST00000120205 934 ntBASIC10.3□□□□□ -0.76
Nedd8P29595 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nedd8P29595 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC10.3□□□□□ -0.76
Nedd8P29595 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC10.3□□□□□ -0.76
Nedd8P29595 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nedd8P29595 Gm6244-201ENSMUST00000178732 841 ntBASIC10.3□□□□□ -0.76
Nedd8P29595 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC10.3□□□□□ -0.76
Nedd8P29595 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.3□□□□□ -0.76
Nedd8P29595 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.3□□□□□ -0.76
Nedd8P29595 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nedd8P29595 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC10.3□□□□□ -0.76
Nedd8P29595 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.3□□□□□ -0.76
Nedd8P29595 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC10.3□□□□□ -0.76
Nedd8P29595 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nedd8P29595 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nedd8P29595 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC10.3□□□□□ -0.76
Nedd8P29595 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nedd8P29595 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nedd8P29595 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nedd8P29595 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Nedd8P29595 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nedd8P29595 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nedd8P29595 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nedd8P29595 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Nedd8P29595 Gramd1b-202ENSMUST00000118159 2781 ntTSL 5 BASIC10.3□□□□□ -0.76
Nedd8P29595 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nedd8P29595 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC10.3□□□□□ -0.76
Nedd8P29595 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nedd8P29595 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nedd8P29595 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nedd8P29595 Smarcc2-203ENSMUST00000105235 4032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nedd8P29595 Wdr37-212ENSMUST00000176922 3780 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nedd8P29595 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nedd8P29595 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nedd8P29595 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nedd8P29595 Zbtb8b-201ENSMUST00000053042 3288 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nedd8P29595 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nedd8P29595 Eef2k-204ENSMUST00000106489 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nedd8P29595 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nedd8P29595 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Nedd8P29595 Rd3-202ENSMUST00000180463 3724 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nedd8P29595 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nedd8P29595 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nedd8P29595 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC10.29□□□□□ -0.76
Nedd8P29595 Gm10425-201ENSMUST00000181085 3364 ntTSL 2 BASIC10.29□□□□□ -0.76
Nedd8P29595 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Nedd8P29595 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nedd8P29595 Gm23061-201ENSMUST00000102348 116 ntBASIC10.29□□□□□ -0.76
Nedd8P29595 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC10.29□□□□□ -0.76
Nedd8P29595 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC10.29□□□□□ -0.76
Nedd8P29595 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nedd8P29595 Gm11814-201ENSMUST00000119515 929 ntBASIC10.29□□□□□ -0.76
Nedd8P29595 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Nedd8P29595 Gm25043-201ENSMUST00000158604 212 ntBASIC10.29□□□□□ -0.76
Nedd8P29595 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC10.29□□□□□ -0.76
Nedd8P29595 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nedd8P29595 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nedd8P29595 Gm27682-201ENSMUST00000183930 110 ntBASIC10.29□□□□□ -0.76
Nedd8P29595 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC10.29□□□□□ -0.76
Nedd8P29595 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC10.29□□□□□ -0.76
Nedd8P29595 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nedd8P29595 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nedd8P29595 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nedd8P29595 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nedd8P29595 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.29□□□□□ -0.76
Nedd8P29595 Gm5356-201ENSMUST00000093326 615 ntBASIC10.29□□□□□ -0.76
Nedd8P29595 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nedd8P29595 AC121574.1-201ENSMUST00000228770 3132 ntBASIC10.29□□□□□ -0.76
Nedd8P29595 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nedd8P29595 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.29□□□□□ -0.76
Nedd8P29595 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nedd8P29595 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nedd8P29595 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Nedd8P29595 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nedd8P29595 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nedd8P29595 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nedd8P29595 Gm45124-201ENSMUST00000206723 2755 ntBASIC10.29□□□□□ -0.76
Nedd8P29595 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Nedd8P29595 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
Nedd8P29595 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms