Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC8.66□□□□□ -1.02
PdfS4R2K0 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
PdfS4R2K0 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
PdfS4R2K0 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Eea1-201ENSMUST00000053484 7749 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
PdfS4R2K0 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC8.66□□□□□ -1.02
PdfS4R2K0 Tln2-207ENSMUST00000215784 8330 ntAPPRIS ALT1 TSL 5 BASIC8.66□□□□□ -1.02
PdfS4R2K0 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Hal-202ENSMUST00000129421 5319 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC8.66□□□□□ -1.02
PdfS4R2K0 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC8.66□□□□□ -1.02
PdfS4R2K0 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC8.66□□□□□ -1.02
PdfS4R2K0 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC8.66□□□□□ -1.02
PdfS4R2K0 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC8.66□□□□□ -1.02
PdfS4R2K0 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Rprl1-201ENSMUST00000158050 327 ntBASIC8.66□□□□□ -1.02
PdfS4R2K0 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Gm27046-201ENSMUST00000182160 463 ntBASIC8.66□□□□□ -1.02
PdfS4R2K0 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC8.66□□□□□ -1.02
PdfS4R2K0 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
PdfS4R2K0 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
PdfS4R2K0 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
PdfS4R2K0 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
PdfS4R2K0 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC8.66□□□□□ -1.02
PdfS4R2K0 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC8.66□□□□□ -1.02
PdfS4R2K0 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
PdfS4R2K0 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
PdfS4R2K0 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
PdfS4R2K0 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Usp45-202ENSMUST00000065111 6003 ntAPPRIS P3 TSL 5 BASIC8.66□□□□□ -1.02
PdfS4R2K0 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
PdfS4R2K0 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
PdfS4R2K0 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
PdfS4R2K0 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
PdfS4R2K0 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
PdfS4R2K0 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
PdfS4R2K0 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC8.65□□□□□ -1.02
PdfS4R2K0 Gm37131-201ENSMUST00000192502 1561 ntBASIC8.65□□□□□ -1.02
PdfS4R2K0 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
PdfS4R2K0 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
PdfS4R2K0 Gm6714-201ENSMUST00000218677 2330 ntBASIC8.65□□□□□ -1.02
PdfS4R2K0 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
PdfS4R2K0 Itgb8-201ENSMUST00000026360 8403 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
PdfS4R2K0 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
PdfS4R2K0 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
PdfS4R2K0 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
PdfS4R2K0 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
PdfS4R2K0 Kat6b-207ENSMUST00000182855 6791 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
PdfS4R2K0 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
PdfS4R2K0 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
PdfS4R2K0 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
PdfS4R2K0 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC8.65□□□□□ -1.02
PdfS4R2K0 AC125374.1-201ENSMUST00000213573 1400 ntBASIC8.65□□□□□ -1.02
PdfS4R2K0 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
PdfS4R2K0 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
PdfS4R2K0 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
PdfS4R2K0 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
PdfS4R2K0 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
PdfS4R2K0 Inhbe-201ENSMUST00000059718 5319 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
PdfS4R2K0 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
PdfS4R2K0 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms