Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 AL590440.2-201ENST00000641973 1595 ntBASIC17.8■□□□□ 0.44
UPF2Q9HAU5 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 AC124283.3-201ENST00000570869 594 ntBASIC17.8■□□□□ 0.44
UPF2Q9HAU5 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 AC004466.1-201ENST00000599515 1080 ntBASIC17.8■□□□□ 0.44
UPF2Q9HAU5 AL390754.1-201ENST00000619088 582 ntBASIC17.8■□□□□ 0.44
UPF2Q9HAU5 AC079781.4-201ENST00000641908 219 ntBASIC17.8■□□□□ 0.44
UPF2Q9HAU5 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
UPF2Q9HAU5 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 BX088702.1-201ENST00000610784 235 ntBASIC17.79■□□□□ 0.44
UPF2Q9HAU5 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 INVS-201ENST00000262456 2968 ntTSL 5 BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
UPF2Q9HAU5 TP73-203ENST00000357733 4899 ntTSL 5 BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 GOLGA8IP-202ENST00000611635 2100 ntBASIC17.78■□□□□ 0.44
UPF2Q9HAU5 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms