Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC9.94□□□□□ -0.82
Scrt1Q99M85 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Gm37600-201ENSMUST00000193764 3292 ntBASIC9.94□□□□□ -0.82
Scrt1Q99M85 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Gm37931-201ENSMUST00000194686 2866 ntBASIC9.94□□□□□ -0.82
Scrt1Q99M85 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scrt1Q99M85 AC124397.2-201ENSMUST00000225575 2215 ntBASIC9.94□□□□□ -0.82
Scrt1Q99M85 Gm6189-201ENSMUST00000164487 2082 ntBASIC9.94□□□□□ -0.82
Scrt1Q99M85 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scrt1Q99M85 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC9.93□□□□□ -0.82
Scrt1Q99M85 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scrt1Q99M85 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Mir181d-201ENSMUST00000102383 72 ntBASIC9.93□□□□□ -0.82
Scrt1Q99M85 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Gm12036-201ENSMUST00000120008 530 ntBASIC9.93□□□□□ -0.82
Scrt1Q99M85 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Gm17192-201ENSMUST00000169031 511 ntBASIC9.93□□□□□ -0.82
Scrt1Q99M85 Gm4034-201ENSMUST00000187674 480 ntBASIC9.93□□□□□ -0.82
Scrt1Q99M85 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Gm37852-201ENSMUST00000193027 350 ntBASIC9.93□□□□□ -0.82
Scrt1Q99M85 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Gm6450-201ENSMUST00000200896 574 ntBASIC9.93□□□□□ -0.82
Scrt1Q99M85 Gm7504-201ENSMUST00000201449 424 ntBASIC9.93□□□□□ -0.82
Scrt1Q99M85 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Scrt1Q99M85 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Gm39288-201ENSMUST00000210554 446 ntBASIC9.93□□□□□ -0.82
Scrt1Q99M85 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Gm7940-201ENSMUST00000218195 769 ntBASIC9.93□□□□□ -0.82
Scrt1Q99M85 BC106175-202ENSMUST00000219344 1213 ntBASIC9.93□□□□□ -0.82
Scrt1Q99M85 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC9.93□□□□□ -0.82
Scrt1Q99M85 AC130477.1-201ENSMUST00000226982 420 ntBASIC9.93□□□□□ -0.82
Scrt1Q99M85 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Gm40377-201ENSMUST00000204604 2015 ntBASIC9.93□□□□□ -0.82
Scrt1Q99M85 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Gm18294-201ENSMUST00000176980 1748 ntBASIC9.93□□□□□ -0.82
Scrt1Q99M85 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Scrt1Q99M85 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Scrt1Q99M85 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Scrt1Q99M85 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Scrt1Q99M85 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Scrt1Q99M85 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC9.92□□□□□ -0.82
Scrt1Q99M85 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Scrt1Q99M85 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Scrt1Q99M85 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Scrt1Q99M85 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Scrt1Q99M85 Gm22594-201ENSMUST00000104251 130 ntBASIC9.92□□□□□ -0.82
Scrt1Q99M85 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Scrt1Q99M85 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC9.92□□□□□ -0.82
Scrt1Q99M85 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Scrt1Q99M85 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Scrt1Q99M85 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Scrt1Q99M85 Gm8451-201ENSMUST00000170338 447 ntBASIC9.92□□□□□ -0.82
Scrt1Q99M85 Gm17070-201ENSMUST00000170463 784 ntBASIC9.92□□□□□ -0.82
Scrt1Q99M85 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC9.92□□□□□ -0.82
Scrt1Q99M85 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC9.92□□□□□ -0.82
Scrt1Q99M85 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC9.92□□□□□ -0.82
Scrt1Q99M85 Gm45135-201ENSMUST00000206787 1184 ntBASIC9.92□□□□□ -0.82
Scrt1Q99M85 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Scrt1Q99M85 Gm19046-201ENSMUST00000221263 1298 ntBASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms