Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Asxl2-207ENSMUST00000153102 4462 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Gm44888-201ENSMUST00000209119 2541 ntBASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ube4bQ9ES00 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Gm43112-201ENSMUST00000196665 3122 ntBASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 AC107453.4-201ENSMUST00000227068 1817 ntBASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Gm13570-201ENSMUST00000140763 309 ntBASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Mospd4-201ENSMUST00000180618 576 ntBASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Gm37424-201ENSMUST00000191727 561 ntBASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Gm19309-201ENSMUST00000218295 205 ntBASIC10.8□□□□□ -0.68
Ube4bQ9ES00 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.8□□□□□ -0.68
Ube4bQ9ES00 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.8□□□□□ -0.68
Ube4bQ9ES00 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Bcat1-203ENSMUST00000111742 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ube4bQ9ES00 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Gm38002-201ENSMUST00000193255 180 ntBASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Gm42627-201ENSMUST00000197347 224 ntBASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Gm9004-201ENSMUST00000218739 1222 ntBASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ube4bQ9ES00 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms