Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 AC069335.1-201ENST00000489972 472 ntBASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 SDHD-206ENST00000528182 754 ntTSL 3 BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 SORD2P-201ENST00000558556 1069 ntBASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 KRT18P8-201ENST00000581937 1246 ntBASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 AC018529.1-201ENST00000613063 361 ntBASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 BAP1-211ENST00000615113 489 ntBASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 AC012313.10-201ENST00000623509 926 ntBASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 AC084121.4-201ENST00000641598 221 ntBASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 AC092865.6-201ENST00000642101 219 ntBASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 AF228730.8-201ENST00000642140 221 ntBASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 AC012531.1-201ENST00000562848 2680 ntBASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 AC110048.1-201ENST00000604293 2157 ntBASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 AGGF1P10-201ENST00000635005 2191 ntBASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 LITAF-221ENST00000622633 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SEC22CQ9BRL7 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 CSPG4P11-201ENST00000560634 4910 ntBASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 AC010969.2-201ENST00000602458 3231 ntBASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 AC092053.3-201ENST00000641308 4975 ntBASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 YBX2P1-201ENST00000394192 760 ntBASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 AC092902.6-201ENST00000641783 218 ntBASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 KIF25-AS1-202ENST00000456585 2795 ntTSL 2 BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SEC22CQ9BRL7 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 MDGA1-207ENST00000505425 3021 ntTSL 5 BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 REXO1L1P-201ENST00000379010 6598 ntBASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC12.24□□□□□ -0.45
SEC22CQ9BRL7 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms