Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
HMGB4Q8WW32 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HMGB4Q8WW32 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC14.46□□□□□ -0.1
HMGB4Q8WW32 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
HMGB4Q8WW32 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
HMGB4Q8WW32 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 AGAP7P-201ENST00000582299 2062 ntBASIC14.45□□□□□ -0.1
HMGB4Q8WW32 AGAP14-201ENST00000624701 2060 ntBASIC14.45□□□□□ -0.1
HMGB4Q8WW32 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 DPY19L2P5-201ENST00000456300 331 ntBASIC14.45□□□□□ -0.1
HMGB4Q8WW32 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 PTK2-225ENST00000520892 571 ntTSL 4 BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 NEU3-207ENST00000534628 746 ntTSL 2 BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 AC090386.2-201ENST00000623010 1039 ntBASIC14.45□□□□□ -0.1
HMGB4Q8WW32 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 AC006372.4-201ENST00000624122 1543 ntBASIC14.45□□□□□ -0.1
HMGB4Q8WW32 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 AC018442.1-201ENST00000421439 2061 ntBASIC14.45□□□□□ -0.1
HMGB4Q8WW32 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
HMGB4Q8WW32 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 TNRC18P2-201ENST00000417666 2714 ntBASIC14.44□□□□□ -0.1
HMGB4Q8WW32 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 BAK1P1-201ENST00000317045 636 ntBASIC14.44□□□□□ -0.1
HMGB4Q8WW32 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 SIGLEC22P-201ENST00000599104 714 ntBASIC14.44□□□□□ -0.1
HMGB4Q8WW32 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 LINC00431-202ENST00000636375 159 ntBASIC14.44□□□□□ -0.1
HMGB4Q8WW32 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.44□□□□□ -0.1
HMGB4Q8WW32 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms