Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh18Q8VHR0 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh18Q8VHR0 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh18Q8VHR0 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh18Q8VHR0 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh18Q8VHR0 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC10.94□□□□□ -0.66
Pcdh18Q8VHR0 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh18Q8VHR0 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Pcdh18Q8VHR0 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh18Q8VHR0 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh18Q8VHR0 Gm14441-201ENSMUST00000121960 540 ntBASIC10.94□□□□□ -0.66
Pcdh18Q8VHR0 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.94□□□□□ -0.66
Pcdh18Q8VHR0 Gm43179-201ENSMUST00000198797 275 ntBASIC10.94□□□□□ -0.66
Pcdh18Q8VHR0 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC10.94□□□□□ -0.66
Pcdh18Q8VHR0 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.94□□□□□ -0.66
Pcdh18Q8VHR0 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh18Q8VHR0 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh18Q8VHR0 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Pcdh18Q8VHR0 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.94□□□□□ -0.66
Pcdh18Q8VHR0 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh18Q8VHR0 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Pcdh18Q8VHR0 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh18Q8VHR0 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh18Q8VHR0 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.94□□□□□ -0.66
Pcdh18Q8VHR0 Adcy4-201ENSMUST00000002398 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh18Q8VHR0 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh18Q8VHR0 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh18Q8VHR0 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh18Q8VHR0 Smyd1-202ENSMUST00000114186 3292 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh18Q8VHR0 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Pcdh18Q8VHR0 Stpg2-201ENSMUST00000062306 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh18Q8VHR0 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pcdh18Q8VHR0 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Gm38169-201ENSMUST00000191822 2539 ntBASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Gm6439-201ENSMUST00000199849 862 ntBASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Pcdh18Q8VHR0 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.92□□□□□ -0.66
Pcdh18Q8VHR0 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms