Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Clrn1Q8K445 Gm5171-201ENSMUST00000214944 1415 ntBASIC10.65□□□□□ -0.7
Clrn1Q8K445 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Clrn1Q8K445 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Clrn1Q8K445 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Clrn1Q8K445 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Clrn1Q8K445 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Clrn1Q8K445 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Clrn1Q8K445 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Clrn1Q8K445 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC10.64□□□□□ -0.71
Clrn1Q8K445 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Gm12419-201ENSMUST00000116649 636 ntBASIC10.64□□□□□ -0.71
Clrn1Q8K445 Gm12463-201ENSMUST00000118271 849 ntBASIC10.64□□□□□ -0.71
Clrn1Q8K445 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC10.64□□□□□ -0.71
Clrn1Q8K445 Gm15615-201ENSMUST00000118876 198 ntBASIC10.64□□□□□ -0.71
Clrn1Q8K445 Gm13408-201ENSMUST00000119822 798 ntBASIC10.64□□□□□ -0.71
Clrn1Q8K445 Gm13935-201ENSMUST00000121859 798 ntBASIC10.64□□□□□ -0.71
Clrn1Q8K445 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.64□□□□□ -0.71
Clrn1Q8K445 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Gm5342-201ENSMUST00000181982 1003 ntBASIC10.64□□□□□ -0.71
Clrn1Q8K445 Mir6546-201ENSMUST00000184460 62 ntBASIC10.64□□□□□ -0.71
Clrn1Q8K445 AC122891.1-201ENSMUST00000218671 268 ntBASIC10.64□□□□□ -0.71
Clrn1Q8K445 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Clrn1Q8K445 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Clrn1Q8K445 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Gm8737-201ENSMUST00000122208 642 ntBASIC10.63□□□□□ -0.71
Clrn1Q8K445 Gm22846-201ENSMUST00000157706 270 ntBASIC10.63□□□□□ -0.71
Clrn1Q8K445 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Gm44100-201ENSMUST00000204329 436 ntBASIC10.63□□□□□ -0.71
Clrn1Q8K445 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Gm18393-201ENSMUST00000208349 1131 ntBASIC10.63□□□□□ -0.71
Clrn1Q8K445 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Clrn1Q8K445 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.63□□□□□ -0.71
Clrn1Q8K445 CT030170.2-201ENSMUST00000223267 126 ntBASIC10.63□□□□□ -0.71
Clrn1Q8K445 CT573047.1-201ENSMUST00000223652 851 ntBASIC10.63□□□□□ -0.71
Clrn1Q8K445 AC115122.1-201ENSMUST00000224850 1040 ntBASIC10.63□□□□□ -0.71
Clrn1Q8K445 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Clrn1Q8K445 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.63□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms