Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC97Q96F63 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.97□□□□□ -0.01
CCDC97Q96F63 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.97□□□□□ -0.01
CCDC97Q96F63 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC97Q96F63 LRRC59-203ENST00000576448 1531 ntBASIC14.97□□□□□ -0.01
CCDC97Q96F63 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC97Q96F63 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC97Q96F63 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC97Q96F63 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC97Q96F63 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC97Q96F63 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC97Q96F63 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CCDC97Q96F63 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC97Q96F63 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC97Q96F63 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC97Q96F63 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC97Q96F63 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CCDC97Q96F63 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CCDC97Q96F63 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC97Q96F63 MIR1247-201ENST00000408206 136 ntBASIC14.97□□□□□ -0.01
CCDC97Q96F63 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.97□□□□□ -0.01
CCDC97Q96F63 GPAA1P2-201ENST00000417923 928 ntBASIC14.97□□□□□ -0.01
CCDC97Q96F63 NUS1P3-201ENST00000423502 862 ntBASIC14.97□□□□□ -0.01
CCDC97Q96F63 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
CCDC97Q96F63 KRT8P13-201ENST00000463294 1010 ntBASIC14.97□□□□□ -0.01
CCDC97Q96F63 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.97□□□□□ -0.01
CCDC97Q96F63 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.97□□□□□ -0.01
CCDC97Q96F63 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC97Q96F63 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.97□□□□□ -0.01
CCDC97Q96F63 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC97Q96F63 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC97Q96F63 AL139099.5-201ENST00000635274 300 ntBASIC14.97□□□□□ -0.01
CCDC97Q96F63 RHOXF1P1-202ENST00000635473 501 ntBASIC14.97□□□□□ -0.01
CCDC97Q96F63 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC97Q96F63 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC97Q96F63 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC97Q96F63 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC97Q96F63 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC97Q96F63 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CCDC97Q96F63 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC97Q96F63 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC97Q96F63 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC97Q96F63 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC97Q96F63 AC007614.4-201ENST00000564048 1827 ntBASIC14.96□□□□□ -0.01
CCDC97Q96F63 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
CCDC97Q96F63 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC97Q96F63 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.96□□□□□ -0.01
CCDC97Q96F63 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
CCDC97Q96F63 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC97Q96F63 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC97Q96F63 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CCDC97Q96F63 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC97Q96F63 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
CCDC97Q96F63 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC97Q96F63 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CCDC97Q96F63 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC97Q96F63 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC97Q96F63 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC97Q96F63 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.96□□□□□ -0.01
CCDC97Q96F63 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC97Q96F63 C2orf27AP3-201ENST00000434123 579 ntBASIC14.96□□□□□ -0.01
CCDC97Q96F63 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC97Q96F63 FTH1P14-201ENST00000482930 551 ntBASIC14.96□□□□□ -0.01
CCDC97Q96F63 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.96□□□□□ -0.01
CCDC97Q96F63 KRT18P25-201ENST00000508931 1278 ntBASIC14.96□□□□□ -0.01
CCDC97Q96F63 AC022616.1-201ENST00000518688 554 ntBASIC14.96□□□□□ -0.01
CCDC97Q96F63 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC97Q96F63 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC97Q96F63 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.96□□□□□ -0.01
CCDC97Q96F63 AC023310.1-201ENST00000554836 735 ntBASIC14.96□□□□□ -0.01
CCDC97Q96F63 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.96□□□□□ -0.01
CCDC97Q96F63 DUX4L45-201ENST00000566406 1057 ntBASIC14.96□□□□□ -0.01
CCDC97Q96F63 RN7SL560P-201ENST00000577943 264 ntBASIC14.96□□□□□ -0.01
CCDC97Q96F63 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC97Q96F63 MIR3615-201ENST00000581999 87 ntBASIC14.96□□□□□ -0.01
CCDC97Q96F63 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.96□□□□□ -0.01
CCDC97Q96F63 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.96□□□□□ -0.01
CCDC97Q96F63 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC97Q96F63 AL354718.3-201ENST00000616414 581 ntBASIC14.96□□□□□ -0.01
CCDC97Q96F63 CR382287.1-201ENST00000623954 586 ntBASIC14.96□□□□□ -0.01
CCDC97Q96F63 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CCDC97Q96F63 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC97Q96F63 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC97Q96F63 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC97Q96F63 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.96□□□□□ -0.02
CCDC97Q96F63 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC97Q96F63 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC14.96□□□□□ -0.02
CCDC97Q96F63 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC97Q96F63 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC97Q96F63 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC97Q96F63 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
CCDC97Q96F63 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC97Q96F63 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC97Q96F63 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC97Q96F63 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CCDC97Q96F63 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC97Q96F63 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC97Q96F63 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC97Q96F63 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC97Q96F63 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms