Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.76□□□□□ -0.21
PTPN6P29350 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.76□□□□□ -0.21
PTPN6P29350 AC004945.1-201ENST00000416738 983 ntBASIC13.76□□□□□ -0.21
PTPN6P29350 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PTPN6P29350 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PTPN6P29350 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.76□□□□□ -0.21
PTPN6P29350 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PTPN6P29350 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.76□□□□□ -0.21
PTPN6P29350 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
PTPN6P29350 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.76□□□□□ -0.21
PTPN6P29350 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.76□□□□□ -0.21
PTPN6P29350 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.76□□□□□ -0.21
PTPN6P29350 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.76□□□□□ -0.21
PTPN6P29350 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.76□□□□□ -0.21
PTPN6P29350 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.76□□□□□ -0.21
PTPN6P29350 AC008687.7-202ENST00000637404 953 ntBASIC13.76□□□□□ -0.21
PTPN6P29350 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTPN6P29350 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTPN6P29350 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PTPN6P29350 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
PTPN6P29350 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTPN6P29350 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
PTPN6P29350 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PTPN6P29350 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
PTPN6P29350 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
PTPN6P29350 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
PTPN6P29350 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTPN6P29350 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTPN6P29350 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.75□□□□□ -0.21
PTPN6P29350 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTPN6P29350 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTPN6P29350 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTPN6P29350 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.75□□□□□ -0.21
PTPN6P29350 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTPN6P29350 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTPN6P29350 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTPN6P29350 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTPN6P29350 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
PTPN6P29350 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTPN6P29350 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTPN6P29350 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.75□□□□□ -0.21
PTPN6P29350 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.75□□□□□ -0.21
PTPN6P29350 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTPN6P29350 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
PTPN6P29350 NCLP1-201ENST00000445357 1963 ntBASIC13.75□□□□□ -0.21
PTPN6P29350 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
PTPN6P29350 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTPN6P29350 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.75□□□□□ -0.21
PTPN6P29350 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTPN6P29350 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTPN6P29350 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTPN6P29350 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PTPN6P29350 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.75□□□□□ -0.21
PTPN6P29350 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
PTPN6P29350 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.75□□□□□ -0.21
PTPN6P29350 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PTPN6P29350 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.75□□□□□ -0.21
PTPN6P29350 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.75□□□□□ -0.21
PTPN6P29350 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.75□□□□□ -0.21
PTPN6P29350 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.75□□□□□ -0.21
PTPN6P29350 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PTPN6P29350 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PTPN6P29350 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.75□□□□□ -0.21
PTPN6P29350 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.75□□□□□ -0.21
PTPN6P29350 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PTPN6P29350 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.75□□□□□ -0.21
PTPN6P29350 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTPN6P29350 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTPN6P29350 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.75□□□□□ -0.21
PTPN6P29350 DGCR9-201ENST00000609630 2415 ntBASIC13.75□□□□□ -0.21
PTPN6P29350 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.75□□□□□ -0.21
PTPN6P29350 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTPN6P29350 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
PTPN6P29350 AC099521.3-201ENST00000624251 2938 ntBASIC13.75□□□□□ -0.21
PTPN6P29350 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTPN6P29350 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTPN6P29350 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PTPN6P29350 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PTPN6P29350 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
PTPN6P29350 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PTPN6P29350 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
PTPN6P29350 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PTPN6P29350 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PTPN6P29350 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PTPN6P29350 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PTPN6P29350 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.74□□□□□ -0.21
PTPN6P29350 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
PTPN6P29350 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PTPN6P29350 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PTPN6P29350 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
PTPN6P29350 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PTPN6P29350 AC007274.1-201ENST00000439805 662 ntBASIC13.74□□□□□ -0.21
PTPN6P29350 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PTPN6P29350 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.74□□□□□ -0.21
PTPN6P29350 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.74□□□□□ -0.21
PTPN6P29350 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.74□□□□□ -0.21
PTPN6P29350 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.74□□□□□ -0.21
PTPN6P29350 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.74□□□□□ -0.21
PTPN6P29350 AC023310.1-201ENST00000554836 735 ntBASIC13.74□□□□□ -0.21
PTPN6P29350 AC005586.2-201ENST00000563946 837 ntBASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms