Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.32■□□□□ 0.2
TPM3P06753 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.32■□□□□ 0.2
TPM3P06753 AC109322.1-201ENST00000524499 1264 ntBASIC16.32■□□□□ 0.2
TPM3P06753 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC16.32■□□□□ 0.2
TPM3P06753 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.32■□□□□ 0.2
TPM3P06753 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC16.32■□□□□ 0.2
TPM3P06753 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TPM3P06753 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TPM3P06753 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TPM3P06753 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TPM3P06753 AC003102.2-201ENST00000589195 1469 ntBASIC16.32■□□□□ 0.2
TPM3P06753 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.32■□□□□ 0.2
TPM3P06753 AC027612.4-201ENST00000605371 583 ntBASIC16.32■□□□□ 0.2
TPM3P06753 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
TPM3P06753 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.32■□□□□ 0.2
TPM3P06753 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
TPM3P06753 AC100757.3-201ENST00000622361 1406 ntBASIC16.32■□□□□ 0.2
TPM3P06753 AC007431.3-201ENST00000623221 587 ntBASIC16.32■□□□□ 0.2
TPM3P06753 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TPM3P06753 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TPM3P06753 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TPM3P06753 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TPM3P06753 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TPM3P06753 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TPM3P06753 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
TPM3P06753 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC16.32■□□□□ 0.2
TPM3P06753 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TPM3P06753 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC16.31■□□□□ 0.2
TPM3P06753 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC16.31■□□□□ 0.2
TPM3P06753 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
TPM3P06753 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM3P06753 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM3P06753 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
TPM3P06753 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.31■□□□□ 0.2
TPM3P06753 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM3P06753 Z98257.2-202ENST00000641138 1548 ntBASIC16.31■□□□□ 0.2
TPM3P06753 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM3P06753 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM3P06753 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM3P06753 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TPM3P06753 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TPM3P06753 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM3P06753 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TPM3P06753 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC16.31■□□□□ 0.2
TPM3P06753 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.31■□□□□ 0.2
TPM3P06753 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.31■□□□□ 0.2
TPM3P06753 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
TPM3P06753 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM3P06753 GIMAP3P-201ENST00000495150 836 ntBASIC16.31■□□□□ 0.2
TPM3P06753 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.31■□□□□ 0.2
TPM3P06753 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TPM3P06753 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.31■□□□□ 0.2
TPM3P06753 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TPM3P06753 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.31■□□□□ 0.2
TPM3P06753 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.31■□□□□ 0.2
TPM3P06753 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.31■□□□□ 0.2
TPM3P06753 AC015911.4-201ENST00000588022 1070 ntBASIC16.31■□□□□ 0.2
TPM3P06753 SRD5A3P1-201ENST00000603021 949 ntBASIC16.31■□□□□ 0.2
TPM3P06753 AL671883.3-201ENST00000603274 991 ntBASIC16.31■□□□□ 0.2
TPM3P06753 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM3P06753 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.31■□□□□ 0.2
TPM3P06753 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.31■□□□□ 0.2
TPM3P06753 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TPM3P06753 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TPM3P06753 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC16.31■□□□□ 0.2
TPM3P06753 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM3P06753 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC16.31■□□□□ 0.2
TPM3P06753 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TPM3P06753 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM3P06753 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM3P06753 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM3P06753 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TPM3P06753 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM3P06753 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM3P06753 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM3P06753 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TPM3P06753 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC16.3■□□□□ 0.2
TPM3P06753 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM3P06753 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM3P06753 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC16.3■□□□□ 0.2
TPM3P06753 AL118506.1-201ENST00000601296 3082 ntBASIC16.3■□□□□ 0.2
TPM3P06753 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM3P06753 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM3P06753 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TPM3P06753 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM3P06753 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM3P06753 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TPM3P06753 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM3P06753 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TPM3P06753 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TPM3P06753 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TPM3P06753 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.3■□□□□ 0.2
TPM3P06753 TSEN15P1-201ENST00000423257 515 ntBASIC16.3■□□□□ 0.2
TPM3P06753 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TPM3P06753 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.3■□□□□ 0.2
TPM3P06753 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.3■□□□□ 0.2
TPM3P06753 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.3■□□□□ 0.2
TPM3P06753 AL590560.3-201ENST00000623350 461 ntBASIC16.3■□□□□ 0.2
TPM3P06753 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.3■□□□□ 0.2
TPM3P06753 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms