Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Gm44651-201ENSMUST00000207343 372 ntBASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Gm19178-201ENSMUST00000217524 1819 ntBASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Mir8093-201ENSMUST00000185043 137 ntBASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.04□□□□□ -0.48
Trim6Q8BGE7 AY702102-202ENSMUST00000194651 1173 ntBASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Gm42602-201ENSMUST00000200288 3224 ntBASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim6Q8BGE7 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Gm8752-201ENSMUST00000173427 1694 ntBASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Gm8320-201ENSMUST00000177584 1762 ntBASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Gm8303-201ENSMUST00000178371 1762 ntBASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Gm8331-201ENSMUST00000178433 1762 ntBASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Gm10463-202ENSMUST00000195772 2889 ntBASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Gm22133-201ENSMUST00000102082 109 ntBASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Gm3329-201ENSMUST00000159873 556 ntBASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Gm5982-201ENSMUST00000196234 512 ntBASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim6Q8BGE7 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms