Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Prox1P48437 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Prox1P48437 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Prox1P48437 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Prox1P48437 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Prox1P48437 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC10.9□□□□□ -0.67
Prox1P48437 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Prox1P48437 Gm10463-202ENSMUST00000195772 2889 ntBASIC10.9□□□□□ -0.67
Prox1P48437 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.67
Prox1P48437 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Prox1P48437 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Prox1P48437 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Prox1P48437 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Prox1P48437 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Prox1P48437 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Prox1P48437 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Prox1P48437 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Prox1P48437 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Prox1P48437 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Prox1P48437 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prox1P48437 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prox1P48437 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prox1P48437 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prox1P48437 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.89□□□□□ -0.67
Prox1P48437 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Prox1P48437 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prox1P48437 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prox1P48437 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Prox1P48437 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Prox1P48437 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Prox1P48437 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prox1P48437 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prox1P48437 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prox1P48437 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Prox1P48437 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prox1P48437 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prox1P48437 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prox1P48437 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC10.89□□□□□ -0.67
Prox1P48437 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Prox1P48437 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prox1P48437 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.89□□□□□ -0.67
Prox1P48437 Gm16570-201ENSMUST00000161951 436 ntBASIC10.89□□□□□ -0.67
Prox1P48437 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.89□□□□□ -0.67
Prox1P48437 Gm5070-201ENSMUST00000177599 862 ntBASIC10.89□□□□□ -0.67
Prox1P48437 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.89□□□□□ -0.67
Prox1P48437 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.89□□□□□ -0.67
Prox1P48437 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Prox1P48437 Gm4607-201ENSMUST00000206649 577 ntBASIC10.89□□□□□ -0.67
Prox1P48437 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.89□□□□□ -0.67
Prox1P48437 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.89□□□□□ -0.67
Prox1P48437 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prox1P48437 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Prox1P48437 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prox1P48437 Gm8320-201ENSMUST00000177584 1762 ntBASIC10.89□□□□□ -0.67
Prox1P48437 Gm8303-201ENSMUST00000178371 1762 ntBASIC10.89□□□□□ -0.67
Prox1P48437 Gm8331-201ENSMUST00000178433 1762 ntBASIC10.89□□□□□ -0.67
Prox1P48437 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prox1P48437 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Prox1P48437 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Prox1P48437 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Prox1P48437 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prox1P48437 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prox1P48437 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prox1P48437 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Prox1P48437 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prox1P48437 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Prox1P48437 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prox1P48437 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prox1P48437 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prox1P48437 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC10.89□□□□□ -0.67
Prox1P48437 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.89□□□□□ -0.67
Prox1P48437 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC10.89□□□□□ -0.67
Prox1P48437 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Prox1P48437 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Prox1P48437 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Prox1P48437 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Prox1P48437 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Prox1P48437 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Prox1P48437 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prox1P48437 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.88□□□□□ -0.67
Prox1P48437 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.88□□□□□ -0.67
Prox1P48437 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prox1P48437 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Prox1P48437 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC10.88□□□□□ -0.67
Prox1P48437 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prox1P48437 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prox1P48437 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prox1P48437 Gm23270-201ENSMUST00000104055 131 ntBASIC10.88□□□□□ -0.67
Prox1P48437 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prox1P48437 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Prox1P48437 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Prox1P48437 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.88□□□□□ -0.67
Prox1P48437 Gm6963-201ENSMUST00000147879 379 ntBASIC10.88□□□□□ -0.67
Prox1P48437 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.88□□□□□ -0.67
Prox1P48437 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Prox1P48437 Gm2991-201ENSMUST00000173338 480 ntBASIC10.88□□□□□ -0.67
Prox1P48437 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Prox1P48437 Gm6334-201ENSMUST00000207083 228 ntBASIC10.88□□□□□ -0.67
Prox1P48437 Gm18056-201ENSMUST00000207670 568 ntBASIC10.88□□□□□ -0.67
Prox1P48437 Gm18061-201ENSMUST00000208350 562 ntBASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms