Protein–RNA interactions for Protein: Q9CUN6

Smurf1, E3 ubiquitin-protein ligase SMURF1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smurf1Q9CUN6 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Gm15370-201ENSMUST00000117158 253 ntBASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Gm13297-201ENSMUST00000120205 934 ntBASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Gm14381-201ENSMUST00000122105 414 ntBASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Gm13786-201ENSMUST00000122371 333 ntBASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Gm28882-201ENSMUST00000185504 314 ntBASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Gm43966-201ENSMUST00000203301 612 ntBASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Gm5403-201ENSMUST00000117105 2795 ntBASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10.34□□□□□ -0.75
Smurf1Q9CUN6 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Gm12463-201ENSMUST00000118271 849 ntBASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Gm25043-201ENSMUST00000158604 212 ntBASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Gm18893-201ENSMUST00000198416 943 ntBASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Gm7172-201ENSMUST00000218047 1152 ntBASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Gm9996-201ENSMUST00000070359 913 ntBASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Smurf1Q9CUN6 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms