Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Mir1938-201ENSMUST00000158746 100 ntBASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Gm38317-201ENSMUST00000195564 343 ntBASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Gm11661-201ENSMUST00000121761 1327 ntBASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Ska1Q9CPV1 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Gm22133-201ENSMUST00000102082 109 ntBASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Gm26286-201ENSMUST00000104166 134 ntBASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Gm15271-201ENSMUST00000134627 2110 ntTSL 5 BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Gm8856-201ENSMUST00000185254 1144 ntBASIC10.74□□□□□ -0.69
Ska1Q9CPV1 AA914427-201ENSMUST00000193194 1166 ntBASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Gm43758-201ENSMUST00000199500 367 ntBASIC10.74□□□□□ -0.69
Ska1Q9CPV1 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Gm5705-201ENSMUST00000066241 711 ntBASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Ska1Q9CPV1 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms