Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.07□□□□□ -0.48
Trim6Q8BGE7 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trim6Q8BGE7 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trim6Q8BGE7 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trim6Q8BGE7 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim6Q8BGE7 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim6Q8BGE7 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim6Q8BGE7 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Trim6Q8BGE7 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Trim6Q8BGE7 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim6Q8BGE7 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim6Q8BGE7 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim6Q8BGE7 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trim6Q8BGE7 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.07□□□□□ -0.48
Trim6Q8BGE7 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim6Q8BGE7 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim6Q8BGE7 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim6Q8BGE7 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim6Q8BGE7 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trim6Q8BGE7 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Trim6Q8BGE7 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim6Q8BGE7 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.07□□□□□ -0.48
Trim6Q8BGE7 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim6Q8BGE7 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Gm9368-201ENSMUST00000219348 831 ntBASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim6Q8BGE7 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Gm12742-201ENSMUST00000117326 410 ntBASIC12.05□□□□□ -0.48
Trim6Q8BGE7 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Gm27501-201ENSMUST00000183599 107 ntBASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Uba52-ps-201ENSMUST00000183770 379 ntBASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim6Q8BGE7 Gm8885-201ENSMUST00000189382 598 ntBASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms