Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SRP9P49458 COX5BP8-201ENST00000416911 349 ntBASIC12.98□□□□□ -0.33
SRP9P49458 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC12.98□□□□□ -0.33
SRP9P49458 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SRP9P49458 TTTY23B-201ENST00000442790 549 ntBASIC12.98□□□□□ -0.33
SRP9P49458 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SRP9P49458 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC12.98□□□□□ -0.33
SRP9P49458 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SRP9P49458 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.98□□□□□ -0.33
SRP9P49458 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.98□□□□□ -0.33
SRP9P49458 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SRP9P49458 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
SRP9P49458 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
SRP9P49458 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SRP9P49458 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SRP9P49458 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SRP9P49458 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SRP9P49458 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SRP9P49458 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SRP9P49458 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SRP9P49458 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SRP9P49458 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SRP9P49458 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SRP9P49458 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SRP9P49458 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SRP9P49458 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SRP9P49458 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
SRP9P49458 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SRP9P49458 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRP9P49458 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SRP9P49458 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
SRP9P49458 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
SRP9P49458 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SRP9P49458 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.97□□□□□ -0.33
SRP9P49458 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SRP9P49458 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.97□□□□□ -0.33
SRP9P49458 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.97□□□□□ -0.33
SRP9P49458 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SRP9P49458 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRP9P49458 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRP9P49458 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRP9P49458 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRP9P49458 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRP9P49458 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRP9P49458 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRP9P49458 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRP9P49458 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
SRP9P49458 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SRP9P49458 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRP9P49458 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
SRP9P49458 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SRP9P49458 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRP9P49458 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SRP9P49458 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.97□□□□□ -0.33
SRP9P49458 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SRP9P49458 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SRP9P49458 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SRP9P49458 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
SRP9P49458 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
SRP9P49458 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC12.97□□□□□ -0.33
SRP9P49458 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
SRP9P49458 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
SRP9P49458 AL355864.2-201ENST00000447420 863 ntBASIC12.97□□□□□ -0.33
SRP9P49458 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC12.97□□□□□ -0.33
SRP9P49458 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.97□□□□□ -0.33
SRP9P49458 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SRP9P49458 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.97□□□□□ -0.33
SRP9P49458 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.97□□□□□ -0.33
SRP9P49458 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.97□□□□□ -0.33
SRP9P49458 CLUHP6-201ENST00000580789 941 ntBASIC12.97□□□□□ -0.33
SRP9P49458 PRSS30P-206ENST00000641773 873 ntBASIC12.97□□□□□ -0.33
SRP9P49458 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SRP9P49458 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
SRP9P49458 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRP9P49458 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRP9P49458 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.97□□□□□ -0.33
SRP9P49458 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.97□□□□□ -0.33
SRP9P49458 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
SRP9P49458 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRP9P49458 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRP9P49458 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SRP9P49458 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRP9P49458 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SRP9P49458 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SRP9P49458 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRP9P49458 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
SRP9P49458 LRRC59-203ENST00000576448 1531 ntBASIC12.97□□□□□ -0.33
SRP9P49458 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SRP9P49458 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SRP9P49458 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SRP9P49458 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
SRP9P49458 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRP9P49458 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
SRP9P49458 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRP9P49458 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SRP9P49458 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SRP9P49458 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SRP9P49458 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SRP9P49458 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
SRP9P49458 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms