Protein–RNA interactions for Protein: S4R2D1

Gm5493, Predicted gene 5493, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5493S4R2D1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm5493S4R2D1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm5493S4R2D1 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm5493S4R2D1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm5493S4R2D1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gm5493S4R2D1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm5493S4R2D1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Gm5493S4R2D1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm5493S4R2D1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm5493S4R2D1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gm5493S4R2D1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gm5493S4R2D1 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm5493S4R2D1 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Gm5493S4R2D1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm5493S4R2D1 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5493S4R2D1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5493S4R2D1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5493S4R2D1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.16■□□□□ 0.34
Gm5493S4R2D1 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5493S4R2D1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5493S4R2D1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5493S4R2D1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5493S4R2D1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5493S4R2D1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5493S4R2D1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.16■□□□□ 0.34
Gm5493S4R2D1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5493S4R2D1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5493S4R2D1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5493S4R2D1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5493S4R2D1 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5493S4R2D1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5493S4R2D1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Gm5493S4R2D1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5493S4R2D1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.15■□□□□ 0.34
Gm5493S4R2D1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Gm5493S4R2D1 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5493S4R2D1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Gm5493S4R2D1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5493S4R2D1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5493S4R2D1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5493S4R2D1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5493S4R2D1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5493S4R2D1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5493S4R2D1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5493S4R2D1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5493S4R2D1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5493S4R2D1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
Gm5493S4R2D1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Gm5493S4R2D1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Gm5493S4R2D1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5493S4R2D1 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5493S4R2D1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5493S4R2D1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5493S4R2D1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5493S4R2D1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.14■□□□□ 0.33
Gm5493S4R2D1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5493S4R2D1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5493S4R2D1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5493S4R2D1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.13■□□□□ 0.33
Gm5493S4R2D1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5493S4R2D1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5493S4R2D1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5493S4R2D1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5493S4R2D1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5493S4R2D1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.13■□□□□ 0.33
Gm5493S4R2D1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5493S4R2D1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5493S4R2D1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Gm5493S4R2D1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5493S4R2D1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5493S4R2D1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5493S4R2D1 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5493S4R2D1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5493S4R2D1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Gm5493S4R2D1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5493S4R2D1 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5493S4R2D1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5493S4R2D1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5493S4R2D1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5493S4R2D1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5493S4R2D1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Gm5493S4R2D1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5493S4R2D1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5493S4R2D1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5493S4R2D1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5493S4R2D1 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm5493S4R2D1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Gm5493S4R2D1 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5493S4R2D1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Gm5493S4R2D1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5493S4R2D1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5493S4R2D1 Gm8503-201ENSMUST00000118131 455 ntBASIC17.11■□□□□ 0.33
Gm5493S4R2D1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5493S4R2D1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gm5493S4R2D1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5493S4R2D1 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Gm5493S4R2D1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Gm5493S4R2D1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5493S4R2D1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5493S4R2D1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms