Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ClcnkaQ9WUB7 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ClcnkaQ9WUB7 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ClcnkaQ9WUB7 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ClcnkaQ9WUB7 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ClcnkaQ9WUB7 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ClcnkaQ9WUB7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ClcnkaQ9WUB7 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
ClcnkaQ9WUB7 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.65■□□□□ 0.58
ClcnkaQ9WUB7 Rps24-207ENSMUST00000224568 714 ntBASIC18.65■□□□□ 0.58
ClcnkaQ9WUB7 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ClcnkaQ9WUB7 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ClcnkaQ9WUB7 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.65■□□□□ 0.58
ClcnkaQ9WUB7 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.65■□□□□ 0.58
ClcnkaQ9WUB7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ClcnkaQ9WUB7 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
ClcnkaQ9WUB7 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ClcnkaQ9WUB7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ClcnkaQ9WUB7 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ClcnkaQ9WUB7 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ClcnkaQ9WUB7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.64■□□□□ 0.57
ClcnkaQ9WUB7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
ClcnkaQ9WUB7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ClcnkaQ9WUB7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ClcnkaQ9WUB7 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ClcnkaQ9WUB7 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClcnkaQ9WUB7 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
ClcnkaQ9WUB7 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ClcnkaQ9WUB7 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClcnkaQ9WUB7 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClcnkaQ9WUB7 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClcnkaQ9WUB7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClcnkaQ9WUB7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ClcnkaQ9WUB7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ClcnkaQ9WUB7 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClcnkaQ9WUB7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClcnkaQ9WUB7 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ClcnkaQ9WUB7 Gm14117-201ENSMUST00000122417 843 ntBASIC18.62■□□□□ 0.57
ClcnkaQ9WUB7 Gm45102-201ENSMUST00000207427 857 ntBASIC18.62■□□□□ 0.57
ClcnkaQ9WUB7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ClcnkaQ9WUB7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ClcnkaQ9WUB7 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ClcnkaQ9WUB7 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ClcnkaQ9WUB7 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ClcnkaQ9WUB7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ClcnkaQ9WUB7 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.62■□□□□ 0.57
ClcnkaQ9WUB7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ClcnkaQ9WUB7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ClcnkaQ9WUB7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ClcnkaQ9WUB7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.61■□□□□ 0.57
ClcnkaQ9WUB7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ClcnkaQ9WUB7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.61■□□□□ 0.57
ClcnkaQ9WUB7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.61■□□□□ 0.57
ClcnkaQ9WUB7 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ClcnkaQ9WUB7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ClcnkaQ9WUB7 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ClcnkaQ9WUB7 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.61■□□□□ 0.57
ClcnkaQ9WUB7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ClcnkaQ9WUB7 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ClcnkaQ9WUB7 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ClcnkaQ9WUB7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ClcnkaQ9WUB7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ClcnkaQ9WUB7 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ClcnkaQ9WUB7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ClcnkaQ9WUB7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.6■□□□□ 0.57
ClcnkaQ9WUB7 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ClcnkaQ9WUB7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ClcnkaQ9WUB7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
ClcnkaQ9WUB7 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ClcnkaQ9WUB7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ClcnkaQ9WUB7 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ClcnkaQ9WUB7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ClcnkaQ9WUB7 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ClcnkaQ9WUB7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.6■□□□□ 0.57
ClcnkaQ9WUB7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ClcnkaQ9WUB7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ClcnkaQ9WUB7 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ClcnkaQ9WUB7 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ClcnkaQ9WUB7 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ClcnkaQ9WUB7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ClcnkaQ9WUB7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ClcnkaQ9WUB7 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ClcnkaQ9WUB7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ClcnkaQ9WUB7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ClcnkaQ9WUB7 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ClcnkaQ9WUB7 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ClcnkaQ9WUB7 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ClcnkaQ9WUB7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ClcnkaQ9WUB7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ClcnkaQ9WUB7 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
ClcnkaQ9WUB7 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ClcnkaQ9WUB7 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ClcnkaQ9WUB7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ClcnkaQ9WUB7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ClcnkaQ9WUB7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ClcnkaQ9WUB7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ClcnkaQ9WUB7 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ClcnkaQ9WUB7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ClcnkaQ9WUB7 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.57■□□□□ 0.56
ClcnkaQ9WUB7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms