Protein–RNA interactions for Protein: Q9JJ94

Ssna1, Sjoegren syndrome nuclear autoantigen 1 homolog, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssna1Q9JJ94 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.62■□□□□ 0.25
Ssna1Q9JJ94 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ssna1Q9JJ94 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Ssna1Q9JJ94 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssna1Q9JJ94 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssna1Q9JJ94 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.62■□□□□ 0.25
Ssna1Q9JJ94 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.62■□□□□ 0.25
Ssna1Q9JJ94 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.62■□□□□ 0.25
Ssna1Q9JJ94 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.62■□□□□ 0.25
Ssna1Q9JJ94 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssna1Q9JJ94 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ssna1Q9JJ94 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.61■□□□□ 0.25
Ssna1Q9JJ94 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssna1Q9JJ94 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssna1Q9JJ94 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssna1Q9JJ94 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssna1Q9JJ94 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssna1Q9JJ94 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssna1Q9JJ94 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.61■□□□□ 0.25
Ssna1Q9JJ94 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssna1Q9JJ94 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssna1Q9JJ94 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ssna1Q9JJ94 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ssna1Q9JJ94 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssna1Q9JJ94 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC16.6■□□□□ 0.25
Ssna1Q9JJ94 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssna1Q9JJ94 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssna1Q9JJ94 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ssna1Q9JJ94 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssna1Q9JJ94 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ssna1Q9JJ94 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssna1Q9JJ94 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ssna1Q9JJ94 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ssna1Q9JJ94 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ssna1Q9JJ94 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Ssna1Q9JJ94 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ssna1Q9JJ94 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ssna1Q9JJ94 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ssna1Q9JJ94 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.59■□□□□ 0.25
Ssna1Q9JJ94 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ssna1Q9JJ94 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ssna1Q9JJ94 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ssna1Q9JJ94 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ssna1Q9JJ94 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ssna1Q9JJ94 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ssna1Q9JJ94 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ssna1Q9JJ94 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Ssna1Q9JJ94 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.58■□□□□ 0.24
Ssna1Q9JJ94 Gm16148-201ENSMUST00000119653 893 ntBASIC16.58■□□□□ 0.24
Ssna1Q9JJ94 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC16.58■□□□□ 0.24
Ssna1Q9JJ94 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ssna1Q9JJ94 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ssna1Q9JJ94 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ssna1Q9JJ94 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ssna1Q9JJ94 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ssna1Q9JJ94 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Ssna1Q9JJ94 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssna1Q9JJ94 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssna1Q9JJ94 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssna1Q9JJ94 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ssna1Q9JJ94 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssna1Q9JJ94 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssna1Q9JJ94 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssna1Q9JJ94 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssna1Q9JJ94 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssna1Q9JJ94 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ssna1Q9JJ94 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssna1Q9JJ94 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssna1Q9JJ94 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.56■□□□□ 0.24
Ssna1Q9JJ94 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ssna1Q9JJ94 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssna1Q9JJ94 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ssna1Q9JJ94 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssna1Q9JJ94 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssna1Q9JJ94 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ssna1Q9JJ94 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.55■□□□□ 0.24
Ssna1Q9JJ94 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssna1Q9JJ94 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Ssna1Q9JJ94 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssna1Q9JJ94 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssna1Q9JJ94 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Ssna1Q9JJ94 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssna1Q9JJ94 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssna1Q9JJ94 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ssna1Q9JJ94 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Ssna1Q9JJ94 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssna1Q9JJ94 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC16.54■□□□□ 0.24
Ssna1Q9JJ94 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Ssna1Q9JJ94 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssna1Q9JJ94 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssna1Q9JJ94 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssna1Q9JJ94 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssna1Q9JJ94 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssna1Q9JJ94 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssna1Q9JJ94 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssna1Q9JJ94 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ssna1Q9JJ94 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ssna1Q9JJ94 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Ssna1Q9JJ94 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ssna1Q9JJ94 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms