Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vmp1Q99KU0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vmp1Q99KU0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vmp1Q99KU0 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.48■□□□□ 0.71
Vmp1Q99KU0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vmp1Q99KU0 Gm7417-201ENSMUST00000192950 473 ntBASIC19.48■□□□□ 0.71
Vmp1Q99KU0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.48■□□□□ 0.71
Vmp1Q99KU0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Vmp1Q99KU0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Vmp1Q99KU0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Vmp1Q99KU0 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vmp1Q99KU0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vmp1Q99KU0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vmp1Q99KU0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vmp1Q99KU0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.47■□□□□ 0.71
Vmp1Q99KU0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vmp1Q99KU0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vmp1Q99KU0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vmp1Q99KU0 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vmp1Q99KU0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.46■□□□□ 0.71
Vmp1Q99KU0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Vmp1Q99KU0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.46■□□□□ 0.71
Vmp1Q99KU0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vmp1Q99KU0 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vmp1Q99KU0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vmp1Q99KU0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vmp1Q99KU0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vmp1Q99KU0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Vmp1Q99KU0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.45■□□□□ 0.7
Vmp1Q99KU0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vmp1Q99KU0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vmp1Q99KU0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vmp1Q99KU0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vmp1Q99KU0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vmp1Q99KU0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Vmp1Q99KU0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vmp1Q99KU0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.44■□□□□ 0.7
Vmp1Q99KU0 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vmp1Q99KU0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Vmp1Q99KU0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Vmp1Q99KU0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vmp1Q99KU0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vmp1Q99KU0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vmp1Q99KU0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vmp1Q99KU0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vmp1Q99KU0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vmp1Q99KU0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vmp1Q99KU0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vmp1Q99KU0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Vmp1Q99KU0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vmp1Q99KU0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Vmp1Q99KU0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vmp1Q99KU0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vmp1Q99KU0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Vmp1Q99KU0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vmp1Q99KU0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vmp1Q99KU0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vmp1Q99KU0 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.42■□□□□ 0.7
Vmp1Q99KU0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vmp1Q99KU0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vmp1Q99KU0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Vmp1Q99KU0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vmp1Q99KU0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vmp1Q99KU0 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.41■□□□□ 0.7
Vmp1Q99KU0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vmp1Q99KU0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.41■□□□□ 0.7
Vmp1Q99KU0 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.41■□□□□ 0.7
Vmp1Q99KU0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vmp1Q99KU0 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.41■□□□□ 0.7
Vmp1Q99KU0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vmp1Q99KU0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vmp1Q99KU0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vmp1Q99KU0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vmp1Q99KU0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vmp1Q99KU0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Vmp1Q99KU0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.4■□□□□ 0.7
Vmp1Q99KU0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vmp1Q99KU0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vmp1Q99KU0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Vmp1Q99KU0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.4■□□□□ 0.7
Vmp1Q99KU0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vmp1Q99KU0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vmp1Q99KU0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vmp1Q99KU0 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vmp1Q99KU0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vmp1Q99KU0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vmp1Q99KU0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vmp1Q99KU0 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vmp1Q99KU0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vmp1Q99KU0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vmp1Q99KU0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vmp1Q99KU0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vmp1Q99KU0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Vmp1Q99KU0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Vmp1Q99KU0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.38■□□□□ 0.69
Vmp1Q99KU0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.38■□□□□ 0.69
Vmp1Q99KU0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vmp1Q99KU0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vmp1Q99KU0 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vmp1Q99KU0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms