Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb18Q91Y02 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb18Q91Y02 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb18Q91Y02 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.27■■□□□ 1
Pcdhb18Q91Y02 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.27■■□□□ 1
Pcdhb18Q91Y02 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb18Q91Y02 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb18Q91Y02 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb18Q91Y02 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb18Q91Y02 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb18Q91Y02 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb18Q91Y02 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb18Q91Y02 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.26■□□□□ 0.99
Pcdhb18Q91Y02 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.26■□□□□ 0.99
Pcdhb18Q91Y02 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb18Q91Y02 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb18Q91Y02 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Pcdhb18Q91Y02 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Pcdhb18Q91Y02 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Pcdhb18Q91Y02 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb18Q91Y02 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb18Q91Y02 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb18Q91Y02 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Pcdhb18Q91Y02 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb18Q91Y02 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb18Q91Y02 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb18Q91Y02 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Pcdhb18Q91Y02 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb18Q91Y02 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.24■□□□□ 0.99
Pcdhb18Q91Y02 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb18Q91Y02 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb18Q91Y02 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb18Q91Y02 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb18Q91Y02 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb18Q91Y02 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb18Q91Y02 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb18Q91Y02 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb18Q91Y02 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb18Q91Y02 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb18Q91Y02 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb18Q91Y02 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.22■□□□□ 0.99
Pcdhb18Q91Y02 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb18Q91Y02 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Pcdhb18Q91Y02 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Pcdhb18Q91Y02 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb18Q91Y02 Gm43530-201ENSMUST00000195920 274 ntBASIC21.22■□□□□ 0.99
Pcdhb18Q91Y02 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.22■□□□□ 0.99
Pcdhb18Q91Y02 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Pcdhb18Q91Y02 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb18Q91Y02 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb18Q91Y02 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Pcdhb18Q91Y02 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb18Q91Y02 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb18Q91Y02 Gm43173-201ENSMUST00000202246 593 ntBASIC21.21■□□□□ 0.99
Pcdhb18Q91Y02 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb18Q91Y02 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb18Q91Y02 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb18Q91Y02 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb18Q91Y02 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb18Q91Y02 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Pcdhb18Q91Y02 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb18Q91Y02 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb18Q91Y02 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Pcdhb18Q91Y02 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb18Q91Y02 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.2■□□□□ 0.98
Pcdhb18Q91Y02 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb18Q91Y02 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb18Q91Y02 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Pcdhb18Q91Y02 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.2■□□□□ 0.98
Pcdhb18Q91Y02 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb18Q91Y02 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb18Q91Y02 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb18Q91Y02 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb18Q91Y02 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb18Q91Y02 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb18Q91Y02 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb18Q91Y02 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb18Q91Y02 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb18Q91Y02 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb18Q91Y02 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb18Q91Y02 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb18Q91Y02 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb18Q91Y02 Gm12251-201ENSMUST00000117893 792 ntBASIC21.18■□□□□ 0.98
Pcdhb18Q91Y02 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.18■□□□□ 0.98
Pcdhb18Q91Y02 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.17■□□□□ 0.98
Pcdhb18Q91Y02 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Pcdhb18Q91Y02 Gm5874-201ENSMUST00000096101 508 ntBASIC21.17■□□□□ 0.98
Pcdhb18Q91Y02 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb18Q91Y02 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb18Q91Y02 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb18Q91Y02 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb18Q91Y02 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb18Q91Y02 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb18Q91Y02 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb18Q91Y02 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.16■□□□□ 0.98
Pcdhb18Q91Y02 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.16■□□□□ 0.98
Pcdhb18Q91Y02 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb18Q91Y02 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb18Q91Y02 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb18Q91Y02 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms