Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh18Q8VHR0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Pcdh18Q8VHR0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdh18Q8VHR0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdh18Q8VHR0 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdh18Q8VHR0 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.45■□□□□ 0.7
Pcdh18Q8VHR0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdh18Q8VHR0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh18Q8VHR0 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh18Q8VHR0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh18Q8VHR0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh18Q8VHR0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.44■□□□□ 0.7
Pcdh18Q8VHR0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh18Q8VHR0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Pcdh18Q8VHR0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh18Q8VHR0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh18Q8VHR0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdh18Q8VHR0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh18Q8VHR0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh18Q8VHR0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.43■□□□□ 0.7
Pcdh18Q8VHR0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh18Q8VHR0 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.43■□□□□ 0.7
Pcdh18Q8VHR0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdh18Q8VHR0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.42■□□□□ 0.7
Pcdh18Q8VHR0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh18Q8VHR0 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.42■□□□□ 0.7
Pcdh18Q8VHR0 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh18Q8VHR0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh18Q8VHR0 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh18Q8VHR0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh18Q8VHR0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh18Q8VHR0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh18Q8VHR0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Pcdh18Q8VHR0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdh18Q8VHR0 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Pcdh18Q8VHR0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh18Q8VHR0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh18Q8VHR0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh18Q8VHR0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Pcdh18Q8VHR0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh18Q8VHR0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh18Q8VHR0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh18Q8VHR0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.41■□□□□ 0.7
Pcdh18Q8VHR0 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdh18Q8VHR0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Pcdh18Q8VHR0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh18Q8VHR0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh18Q8VHR0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Pcdh18Q8VHR0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh18Q8VHR0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pcdh18Q8VHR0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh18Q8VHR0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh18Q8VHR0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh18Q8VHR0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.4■□□□□ 0.7
Pcdh18Q8VHR0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdh18Q8VHR0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdh18Q8VHR0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Pcdh18Q8VHR0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh18Q8VHR0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh18Q8VHR0 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdh18Q8VHR0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Pcdh18Q8VHR0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.39■□□□□ 0.69
Pcdh18Q8VHR0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh18Q8VHR0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh18Q8VHR0 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.38■□□□□ 0.69
Pcdh18Q8VHR0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Pcdh18Q8VHR0 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh18Q8VHR0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh18Q8VHR0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Pcdh18Q8VHR0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh18Q8VHR0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Pcdh18Q8VHR0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh18Q8VHR0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh18Q8VHR0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh18Q8VHR0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.37■□□□□ 0.69
Pcdh18Q8VHR0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh18Q8VHR0 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh18Q8VHR0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh18Q8VHR0 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh18Q8VHR0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh18Q8VHR0 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh18Q8VHR0 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh18Q8VHR0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh18Q8VHR0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh18Q8VHR0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh18Q8VHR0 Cap2-205ENSMUST00000225824 1634 ntBASIC19.36■□□□□ 0.69
Pcdh18Q8VHR0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh18Q8VHR0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh18Q8VHR0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Pcdh18Q8VHR0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh18Q8VHR0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh18Q8VHR0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh18Q8VHR0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Pcdh18Q8VHR0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.35■□□□□ 0.69
Pcdh18Q8VHR0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.35■□□□□ 0.69
Pcdh18Q8VHR0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.35■□□□□ 0.69
Pcdh18Q8VHR0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh18Q8VHR0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh18Q8VHR0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh18Q8VHR0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms