Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
TRPM4Q8TD43 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
TRPM4Q8TD43 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
TRPM4Q8TD43 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC27.32■■□□□ 1.96
TRPM4Q8TD43 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TRPM4Q8TD43 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC27.31■■□□□ 1.96
TRPM4Q8TD43 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TRPM4Q8TD43 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
TRPM4Q8TD43 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC27.31■■□□□ 1.96
TRPM4Q8TD43 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC27.31■■□□□ 1.96
TRPM4Q8TD43 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
TRPM4Q8TD43 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC27.31■■□□□ 1.96
TRPM4Q8TD43 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC27.31■■□□□ 1.96
TRPM4Q8TD43 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
TRPM4Q8TD43 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
TRPM4Q8TD43 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
TRPM4Q8TD43 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
TRPM4Q8TD43 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
TRPM4Q8TD43 GXYLT1P2-201ENST00000433312 1230 ntBASIC27.29■■□□□ 1.96
TRPM4Q8TD43 AC012414.1-201ENST00000556676 535 ntBASIC27.29■■□□□ 1.96
TRPM4Q8TD43 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC27.29■■□□□ 1.96
TRPM4Q8TD43 SLC6A10P-202ENST00000431994 2058 ntBASIC27.28■■□□□ 1.96
TRPM4Q8TD43 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC27.28■■□□□ 1.96
TRPM4Q8TD43 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
TRPM4Q8TD43 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
TRPM4Q8TD43 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TRPM4Q8TD43 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC27.28■■□□□ 1.96
TRPM4Q8TD43 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC27.28■■□□□ 1.96
TRPM4Q8TD43 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC27.28■■□□□ 1.96
TRPM4Q8TD43 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TRPM4Q8TD43 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC27.27■■□□□ 1.96
TRPM4Q8TD43 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TRPM4Q8TD43 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC27.27■■□□□ 1.96
TRPM4Q8TD43 IGHV3-19-201ENST00000521488 291 ntBASIC27.27■■□□□ 1.96
TRPM4Q8TD43 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC27.27■■□□□ 1.96
TRPM4Q8TD43 AICDA-202ENST00000537228 667 ntTSL 5 BASIC27.27■■□□□ 1.96
TRPM4Q8TD43 NTF6G-201ENST00000591094 616 ntBASIC27.27■■□□□ 1.96
TRPM4Q8TD43 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC27.27■■□□□ 1.96
TRPM4Q8TD43 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TRPM4Q8TD43 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TRPM4Q8TD43 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
TRPM4Q8TD43 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
TRPM4Q8TD43 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TRPM4Q8TD43 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC27.26■■□□□ 1.95
TRPM4Q8TD43 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
TRPM4Q8TD43 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TRPM4Q8TD43 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
TRPM4Q8TD43 MIR572-201ENST00000384983 95 ntBASIC27.26■■□□□ 1.95
TRPM4Q8TD43 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC27.26■■□□□ 1.95
TRPM4Q8TD43 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC27.26■■□□□ 1.95
TRPM4Q8TD43 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
TRPM4Q8TD43 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
TRPM4Q8TD43 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
TRPM4Q8TD43 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
TRPM4Q8TD43 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC27.25■■□□□ 1.95
TRPM4Q8TD43 HLA-L-209ENST00000420110 1011 ntBASIC27.25■■□□□ 1.95
TRPM4Q8TD43 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
TRPM4Q8TD43 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
TRPM4Q8TD43 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
TRPM4Q8TD43 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
TRPM4Q8TD43 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC27.24■■□□□ 1.95
TRPM4Q8TD43 ME3-201ENST00000323418 1068 ntTSL 5 BASIC27.24■■□□□ 1.95
TRPM4Q8TD43 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
TRPM4Q8TD43 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC27.24■■□□□ 1.95
TRPM4Q8TD43 MIR6089-201ENST00000616698 64 ntBASIC27.24■■□□□ 1.95
TRPM4Q8TD43 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
TRPM4Q8TD43 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
TRPM4Q8TD43 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC27.23■■□□□ 1.95
TRPM4Q8TD43 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC27.23■■□□□ 1.95
TRPM4Q8TD43 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
TRPM4Q8TD43 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC27.23■■□□□ 1.95
TRPM4Q8TD43 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
TRPM4Q8TD43 USF2-207ENST00000595068 1612 ntTSL 5 BASIC27.23■■□□□ 1.95
TRPM4Q8TD43 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
TRPM4Q8TD43 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.22■■□□□ 1.95
TRPM4Q8TD43 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
TRPM4Q8TD43 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC27.22■■□□□ 1.95
TRPM4Q8TD43 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC27.22■■□□□ 1.95
TRPM4Q8TD43 KRT18P14-201ENST00000534205 1250 ntBASIC27.22■■□□□ 1.95
TRPM4Q8TD43 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC27.22■■□□□ 1.95
TRPM4Q8TD43 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC27.22■■□□□ 1.95
TRPM4Q8TD43 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
TRPM4Q8TD43 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC27.21■■□□□ 1.95
TRPM4Q8TD43 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC27.21■■□□□ 1.95
TRPM4Q8TD43 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
TRPM4Q8TD43 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC27.21■■□□□ 1.95
TRPM4Q8TD43 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
TRPM4Q8TD43 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC27.21■■□□□ 1.95
TRPM4Q8TD43 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.95
TRPM4Q8TD43 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
TRPM4Q8TD43 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC27.2■■□□□ 1.95
TRPM4Q8TD43 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
TRPM4Q8TD43 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC27.2■■□□□ 1.94
TRPM4Q8TD43 TERF1P2-201ENST00000583350 1212 ntBASIC27.2■■□□□ 1.94
TRPM4Q8TD43 AL354811.1-201ENST00000610286 706 ntBASIC27.2■■□□□ 1.94
TRPM4Q8TD43 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.94
TRPM4Q8TD43 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
TRPM4Q8TD43 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC27.2■■□□□ 1.94
TRPM4Q8TD43 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
TRPM4Q8TD43 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms