Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ppp4r4Q8C0Y0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ppp4r4Q8C0Y0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ppp4r4Q8C0Y0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ppp4r4Q8C0Y0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Ppp4r4Q8C0Y0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ppp4r4Q8C0Y0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ppp4r4Q8C0Y0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ppp4r4Q8C0Y0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ppp4r4Q8C0Y0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Ppp4r4Q8C0Y0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.41■□□□□ 0.86
Ppp4r4Q8C0Y0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ppp4r4Q8C0Y0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.41■□□□□ 0.86
Ppp4r4Q8C0Y0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ppp4r4Q8C0Y0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ppp4r4Q8C0Y0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ppp4r4Q8C0Y0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ppp4r4Q8C0Y0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Ppp4r4Q8C0Y0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ppp4r4Q8C0Y0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ppp4r4Q8C0Y0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Ppp4r4Q8C0Y0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ppp4r4Q8C0Y0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.4■□□□□ 0.86
Ppp4r4Q8C0Y0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ppp4r4Q8C0Y0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ppp4r4Q8C0Y0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ppp4r4Q8C0Y0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ppp4r4Q8C0Y0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ppp4r4Q8C0Y0 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
Ppp4r4Q8C0Y0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ppp4r4Q8C0Y0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ppp4r4Q8C0Y0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ppp4r4Q8C0Y0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Ppp4r4Q8C0Y0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.39■□□□□ 0.86
Ppp4r4Q8C0Y0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.39■□□□□ 0.86
Ppp4r4Q8C0Y0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ppp4r4Q8C0Y0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Ppp4r4Q8C0Y0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Ppp4r4Q8C0Y0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ppp4r4Q8C0Y0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ppp4r4Q8C0Y0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ppp4r4Q8C0Y0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ppp4r4Q8C0Y0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.38■□□□□ 0.85
Ppp4r4Q8C0Y0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ppp4r4Q8C0Y0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ppp4r4Q8C0Y0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ppp4r4Q8C0Y0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ppp4r4Q8C0Y0 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.37■□□□□ 0.85
Ppp4r4Q8C0Y0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ppp4r4Q8C0Y0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ppp4r4Q8C0Y0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ppp4r4Q8C0Y0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ppp4r4Q8C0Y0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ppp4r4Q8C0Y0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
Ppp4r4Q8C0Y0 Notumos-201ENSMUST00000151998 2659 ntBASIC20.37■□□□□ 0.85
Ppp4r4Q8C0Y0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Ppp4r4Q8C0Y0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ppp4r4Q8C0Y0 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Ppp4r4Q8C0Y0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.36■□□□□ 0.85
Ppp4r4Q8C0Y0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.36■□□□□ 0.85
Ppp4r4Q8C0Y0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Ppp4r4Q8C0Y0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ppp4r4Q8C0Y0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ppp4r4Q8C0Y0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ppp4r4Q8C0Y0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ppp4r4Q8C0Y0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ppp4r4Q8C0Y0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ppp4r4Q8C0Y0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ppp4r4Q8C0Y0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ppp4r4Q8C0Y0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ppp4r4Q8C0Y0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.35■□□□□ 0.85
Ppp4r4Q8C0Y0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ppp4r4Q8C0Y0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ppp4r4Q8C0Y0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ppp4r4Q8C0Y0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ppp4r4Q8C0Y0 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ppp4r4Q8C0Y0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Ppp4r4Q8C0Y0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
Ppp4r4Q8C0Y0 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.34■□□□□ 0.85
Ppp4r4Q8C0Y0 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ppp4r4Q8C0Y0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Ppp4r4Q8C0Y0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.33■□□□□ 0.85
Ppp4r4Q8C0Y0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ppp4r4Q8C0Y0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.33■□□□□ 0.84
Ppp4r4Q8C0Y0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ppp4r4Q8C0Y0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ppp4r4Q8C0Y0 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ppp4r4Q8C0Y0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ppp4r4Q8C0Y0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Ppp4r4Q8C0Y0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ppp4r4Q8C0Y0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ppp4r4Q8C0Y0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ppp4r4Q8C0Y0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ppp4r4Q8C0Y0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ppp4r4Q8C0Y0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ppp4r4Q8C0Y0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ppp4r4Q8C0Y0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.32■□□□□ 0.84
Ppp4r4Q8C0Y0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.32■□□□□ 0.84
Ppp4r4Q8C0Y0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ppp4r4Q8C0Y0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms