Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc116Q80X53 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc116Q80X53 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.94■□□□□ 0.78
Ccdc116Q80X53 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc116Q80X53 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc116Q80X53 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Ccdc116Q80X53 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc116Q80X53 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.94■□□□□ 0.78
Ccdc116Q80X53 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc116Q80X53 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc116Q80X53 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc116Q80X53 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Ccdc116Q80X53 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc116Q80X53 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Ccdc116Q80X53 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc116Q80X53 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.93■□□□□ 0.78
Ccdc116Q80X53 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.93■□□□□ 0.78
Ccdc116Q80X53 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc116Q80X53 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.93■□□□□ 0.78
Ccdc116Q80X53 Gm40881-201ENSMUST00000223397 166 ntBASIC19.93■□□□□ 0.78
Ccdc116Q80X53 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.93■□□□□ 0.78
Ccdc116Q80X53 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc116Q80X53 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.93■□□□□ 0.78
Ccdc116Q80X53 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccdc116Q80X53 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.92■□□□□ 0.78
Ccdc116Q80X53 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc116Q80X53 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc116Q80X53 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.92■□□□□ 0.78
Ccdc116Q80X53 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.92■□□□□ 0.78
Ccdc116Q80X53 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.92■□□□□ 0.78
Ccdc116Q80X53 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc116Q80X53 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.92■□□□□ 0.78
Ccdc116Q80X53 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ccdc116Q80X53 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Ccdc116Q80X53 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc116Q80X53 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.91■□□□□ 0.78
Ccdc116Q80X53 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc116Q80X53 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.91■□□□□ 0.78
Ccdc116Q80X53 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc116Q80X53 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc116Q80X53 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc116Q80X53 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ccdc116Q80X53 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc116Q80X53 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc116Q80X53 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.9■□□□□ 0.78
Ccdc116Q80X53 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc116Q80X53 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Ccdc116Q80X53 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc116Q80X53 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.9■□□□□ 0.78
Ccdc116Q80X53 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Ccdc116Q80X53 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc116Q80X53 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc116Q80X53 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc116Q80X53 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc116Q80X53 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Ccdc116Q80X53 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Ccdc116Q80X53 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.89■□□□□ 0.77
Ccdc116Q80X53 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc116Q80X53 Gm5812-201ENSMUST00000061073 957 ntBASIC19.89■□□□□ 0.77
Ccdc116Q80X53 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc116Q80X53 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc116Q80X53 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.88■□□□□ 0.77
Ccdc116Q80X53 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Ccdc116Q80X53 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.88■□□□□ 0.77
Ccdc116Q80X53 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.88■□□□□ 0.77
Ccdc116Q80X53 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.88■□□□□ 0.77
Ccdc116Q80X53 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc116Q80X53 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc116Q80X53 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc116Q80X53 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc116Q80X53 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc116Q80X53 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Ccdc116Q80X53 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ccdc116Q80X53 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc116Q80X53 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.87■□□□□ 0.77
Ccdc116Q80X53 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.87■□□□□ 0.77
Ccdc116Q80X53 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.87■□□□□ 0.77
Ccdc116Q80X53 Gm15820-201ENSMUST00000201566 728 ntBASIC19.87■□□□□ 0.77
Ccdc116Q80X53 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc116Q80X53 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc116Q80X53 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc116Q80X53 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc116Q80X53 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc116Q80X53 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.86■□□□□ 0.77
Ccdc116Q80X53 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc116Q80X53 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.86■□□□□ 0.77
Ccdc116Q80X53 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc116Q80X53 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc116Q80X53 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Ccdc116Q80X53 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc116Q80X53 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc116Q80X53 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc116Q80X53 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Ccdc116Q80X53 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.85■□□□□ 0.77
Ccdc116Q80X53 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc116Q80X53 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc116Q80X53 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc116Q80X53 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc116Q80X53 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.84■□□□□ 0.77
Ccdc116Q80X53 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms