Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Smcr8Q3UMB5 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smcr8Q3UMB5 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smcr8Q3UMB5 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Smcr8Q3UMB5 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
Smcr8Q3UMB5 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smcr8Q3UMB5 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smcr8Q3UMB5 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.81■■□□□ 1.08
Smcr8Q3UMB5 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.81■■□□□ 1.08
Smcr8Q3UMB5 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.81■■□□□ 1.08
Smcr8Q3UMB5 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Smcr8Q3UMB5 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.81■■□□□ 1.08
Smcr8Q3UMB5 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smcr8Q3UMB5 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smcr8Q3UMB5 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smcr8Q3UMB5 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.8■■□□□ 1.08
Smcr8Q3UMB5 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smcr8Q3UMB5 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smcr8Q3UMB5 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Smcr8Q3UMB5 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smcr8Q3UMB5 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.8■■□□□ 1.08
Smcr8Q3UMB5 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smcr8Q3UMB5 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smcr8Q3UMB5 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.8■■□□□ 1.08
Smcr8Q3UMB5 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smcr8Q3UMB5 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Smcr8Q3UMB5 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smcr8Q3UMB5 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.79■■□□□ 1.08
Smcr8Q3UMB5 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Smcr8Q3UMB5 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Smcr8Q3UMB5 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smcr8Q3UMB5 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smcr8Q3UMB5 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smcr8Q3UMB5 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smcr8Q3UMB5 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Smcr8Q3UMB5 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smcr8Q3UMB5 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smcr8Q3UMB5 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smcr8Q3UMB5 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smcr8Q3UMB5 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Smcr8Q3UMB5 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Smcr8Q3UMB5 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Smcr8Q3UMB5 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.77■■□□□ 1.08
Smcr8Q3UMB5 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.77■■□□□ 1.08
Smcr8Q3UMB5 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smcr8Q3UMB5 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Smcr8Q3UMB5 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Smcr8Q3UMB5 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smcr8Q3UMB5 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Smcr8Q3UMB5 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
Smcr8Q3UMB5 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.76■■□□□ 1.07
Smcr8Q3UMB5 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smcr8Q3UMB5 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smcr8Q3UMB5 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smcr8Q3UMB5 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smcr8Q3UMB5 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smcr8Q3UMB5 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Smcr8Q3UMB5 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.75■■□□□ 1.07
Smcr8Q3UMB5 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smcr8Q3UMB5 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Smcr8Q3UMB5 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Smcr8Q3UMB5 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.75■■□□□ 1.07
Smcr8Q3UMB5 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smcr8Q3UMB5 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
Smcr8Q3UMB5 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.75■■□□□ 1.07
Smcr8Q3UMB5 Gm43530-201ENSMUST00000195920 274 ntBASIC21.75■■□□□ 1.07
Smcr8Q3UMB5 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smcr8Q3UMB5 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.75■■□□□ 1.07
Smcr8Q3UMB5 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Smcr8Q3UMB5 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.74■■□□□ 1.07
Smcr8Q3UMB5 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.74■■□□□ 1.07
Smcr8Q3UMB5 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smcr8Q3UMB5 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smcr8Q3UMB5 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.74■■□□□ 1.07
Smcr8Q3UMB5 Gm8493-201ENSMUST00000196881 489 ntBASIC21.74■■□□□ 1.07
Smcr8Q3UMB5 Gm43017-201ENSMUST00000198296 752 ntBASIC21.74■■□□□ 1.07
Smcr8Q3UMB5 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Smcr8Q3UMB5 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.74■■□□□ 1.07
Smcr8Q3UMB5 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.74■■□□□ 1.07
Smcr8Q3UMB5 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Smcr8Q3UMB5 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Smcr8Q3UMB5 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Smcr8Q3UMB5 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smcr8Q3UMB5 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smcr8Q3UMB5 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Smcr8Q3UMB5 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smcr8Q3UMB5 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smcr8Q3UMB5 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
Smcr8Q3UMB5 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.72■■□□□ 1.07
Smcr8Q3UMB5 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smcr8Q3UMB5 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smcr8Q3UMB5 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Smcr8Q3UMB5 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smcr8Q3UMB5 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smcr8Q3UMB5 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
Smcr8Q3UMB5 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Smcr8Q3UMB5 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smcr8Q3UMB5 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smcr8Q3UMB5 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.71■■□□□ 1.07
Smcr8Q3UMB5 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms