Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Tnrc6aQ3UHK8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Tnrc6aQ3UHK8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tnrc6aQ3UHK8 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tnrc6aQ3UHK8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tnrc6aQ3UHK8 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.05■□□□□ 0.64
Tnrc6aQ3UHK8 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnrc6aQ3UHK8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.05■□□□□ 0.64
Tnrc6aQ3UHK8 Gm5874-201ENSMUST00000096101 508 ntBASIC19.05■□□□□ 0.64
Tnrc6aQ3UHK8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnrc6aQ3UHK8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnrc6aQ3UHK8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Tnrc6aQ3UHK8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tnrc6aQ3UHK8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.05■□□□□ 0.64
Tnrc6aQ3UHK8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Tnrc6aQ3UHK8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.04■□□□□ 0.64
Tnrc6aQ3UHK8 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnrc6aQ3UHK8 Gm10849-201ENSMUST00000100397 618 ntBASIC19.04■□□□□ 0.64
Tnrc6aQ3UHK8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnrc6aQ3UHK8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Tnrc6aQ3UHK8 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.04■□□□□ 0.64
Tnrc6aQ3UHK8 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnrc6aQ3UHK8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnrc6aQ3UHK8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tnrc6aQ3UHK8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnrc6aQ3UHK8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnrc6aQ3UHK8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnrc6aQ3UHK8 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.03■□□□□ 0.64
Tnrc6aQ3UHK8 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Tnrc6aQ3UHK8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Tnrc6aQ3UHK8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.03■□□□□ 0.64
Tnrc6aQ3UHK8 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnrc6aQ3UHK8 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnrc6aQ3UHK8 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.03■□□□□ 0.64
Tnrc6aQ3UHK8 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnrc6aQ3UHK8 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.03■□□□□ 0.64
Tnrc6aQ3UHK8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Tnrc6aQ3UHK8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tnrc6aQ3UHK8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tnrc6aQ3UHK8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.02■□□□□ 0.64
Tnrc6aQ3UHK8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tnrc6aQ3UHK8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tnrc6aQ3UHK8 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.01■□□□□ 0.63
Tnrc6aQ3UHK8 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnrc6aQ3UHK8 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Tnrc6aQ3UHK8 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnrc6aQ3UHK8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Tnrc6aQ3UHK8 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnrc6aQ3UHK8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tnrc6aQ3UHK8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Tnrc6aQ3UHK8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.01■□□□□ 0.63
Tnrc6aQ3UHK8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19■□□□□ 0.63
Tnrc6aQ3UHK8 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19■□□□□ 0.63
Tnrc6aQ3UHK8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19■□□□□ 0.63
Tnrc6aQ3UHK8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19■□□□□ 0.63
Tnrc6aQ3UHK8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tnrc6aQ3UHK8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Tnrc6aQ3UHK8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Tnrc6aQ3UHK8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnrc6aQ3UHK8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnrc6aQ3UHK8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.99■□□□□ 0.63
Tnrc6aQ3UHK8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnrc6aQ3UHK8 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnrc6aQ3UHK8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnrc6aQ3UHK8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Tnrc6aQ3UHK8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnrc6aQ3UHK8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Tnrc6aQ3UHK8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnrc6aQ3UHK8 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnrc6aQ3UHK8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Tnrc6aQ3UHK8 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Tnrc6aQ3UHK8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Tnrc6aQ3UHK8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tnrc6aQ3UHK8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.98■□□□□ 0.63
Tnrc6aQ3UHK8 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tnrc6aQ3UHK8 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tnrc6aQ3UHK8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Tnrc6aQ3UHK8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tnrc6aQ3UHK8 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Tnrc6aQ3UHK8 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.97■□□□□ 0.63
Tnrc6aQ3UHK8 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.97■□□□□ 0.63
Tnrc6aQ3UHK8 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.97■□□□□ 0.63
Tnrc6aQ3UHK8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.97■□□□□ 0.63
Tnrc6aQ3UHK8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnrc6aQ3UHK8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Tnrc6aQ3UHK8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnrc6aQ3UHK8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnrc6aQ3UHK8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnrc6aQ3UHK8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnrc6aQ3UHK8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Tnrc6aQ3UHK8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.97■□□□□ 0.63
Tnrc6aQ3UHK8 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Tnrc6aQ3UHK8 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.97■□□□□ 0.63
Tnrc6aQ3UHK8 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.97■□□□□ 0.63
Tnrc6aQ3UHK8 Gm40848-201ENSMUST00000221998 324 ntBASIC18.97■□□□□ 0.63
Tnrc6aQ3UHK8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.96■□□□□ 0.63
Tnrc6aQ3UHK8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnrc6aQ3UHK8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnrc6aQ3UHK8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tnrc6aQ3UHK8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms