Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rps28P62858 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rps28P62858 Cxcl14-202ENSMUST00000224801 1467 ntBASIC12.18□□□□□ -0.46
Rps28P62858 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rps28P62858 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rps28P62858 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rps28P62858 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rps28P62858 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rps28P62858 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rps28P62858 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rps28P62858 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rps28P62858 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rps28P62858 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rps28P62858 Dapk1-207ENSMUST00000226059 5009 ntBASIC12.17□□□□□ -0.46
Rps28P62858 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rps28P62858 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rps28P62858 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
Rps28P62858 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rps28P62858 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rps28P62858 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rps28P62858 Snhg20-203ENSMUST00000182811 2153 ntBASIC12.16□□□□□ -0.46
Rps28P62858 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC12.16□□□□□ -0.46
Rps28P62858 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Rps28P62858 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rps28P62858 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC12.16□□□□□ -0.46
Rps28P62858 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rps28P62858 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Rps28P62858 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rps28P62858 Gm15045-201ENSMUST00000117359 883 ntBASIC12.16□□□□□ -0.46
Rps28P62858 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rps28P62858 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rps28P62858 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Rps28P62858 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rps28P62858 Gm37811-201ENSMUST00000192416 2601 ntBASIC12.16□□□□□ -0.46
Rps28P62858 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rps28P62858 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Rps28P62858 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Rps28P62858 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rps28P62858 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rps28P62858 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rps28P62858 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Rps28P62858 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rps28P62858 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rps28P62858 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rps28P62858 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rps28P62858 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.15□□□□□ -0.46
Rps28P62858 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rps28P62858 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Rps28P62858 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rps28P62858 Gm15042-201ENSMUST00000120212 883 ntBASIC12.15□□□□□ -0.46
Rps28P62858 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rps28P62858 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rps28P62858 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rps28P62858 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rps28P62858 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rps28P62858 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rps28P62858 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rps28P62858 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rps28P62858 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rps28P62858 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rps28P62858 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Rps28P62858 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rps28P62858 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rps28P62858 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rps28P62858 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rps28P62858 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rps28P62858 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rps28P62858 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rps28P62858 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rps28P62858 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rps28P62858 Kdm3b-204ENSMUST00000224715 2032 ntBASIC12.13□□□□□ -0.47
Rps28P62858 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rps28P62858 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rps28P62858 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rps28P62858 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rps28P62858 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rps28P62858 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rps28P62858 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rps28P62858 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rps28P62858 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rps28P62858 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rps28P62858 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rps28P62858 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Rps28P62858 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rps28P62858 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC12.12□□□□□ -0.47
Rps28P62858 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rps28P62858 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rps28P62858 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rps28P62858 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rps28P62858 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Rps28P62858 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rps28P62858 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rps28P62858 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Rps28P62858 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rps28P62858 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rps28P62858 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rps28P62858 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rps28P62858 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC12.11□□□□□ -0.47
Rps28P62858 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rps28P62858 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms