Protein–RNA interactions for Protein: P61080

Ube2d1, Ubiquitin-conjugating enzyme E2 D1, mousemouse

Known RBP Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d1P61080 Gm9806-201ENSMUST00000051080 552 ntBASIC14.24□□□□□ -0.13
Ube2d1P61080 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube2d1P61080 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube2d1P61080 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ube2d1P61080 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ube2d1P61080 AC158990.1-201ENSMUST00000221450 2016 ntBASIC14.24□□□□□ -0.13
Ube2d1P61080 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ube2d1P61080 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube2d1P61080 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube2d1P61080 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube2d1P61080 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Ube2d1P61080 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube2d1P61080 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube2d1P61080 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube2d1P61080 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube2d1P61080 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC14.23□□□□□ -0.13
Ube2d1P61080 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube2d1P61080 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube2d1P61080 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube2d1P61080 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube2d1P61080 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube2d1P61080 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Ube2d1P61080 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube2d1P61080 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ube2d1P61080 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube2d1P61080 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube2d1P61080 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC14.22□□□□□ -0.13
Ube2d1P61080 Scarna2-201ENSMUST00000157560 414 ntBASIC14.22□□□□□ -0.13
Ube2d1P61080 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube2d1P61080 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube2d1P61080 Gm16437-201ENSMUST00000025669 507 ntBASIC14.22□□□□□ -0.13
Ube2d1P61080 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube2d1P61080 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube2d1P61080 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ube2d1P61080 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube2d1P61080 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.22□□□□□ -0.13
Ube2d1P61080 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ube2d1P61080 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube2d1P61080 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Ube2d1P61080 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.21□□□□□ -0.13
Ube2d1P61080 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC14.21□□□□□ -0.13
Ube2d1P61080 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube2d1P61080 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube2d1P61080 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube2d1P61080 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ube2d1P61080 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube2d1P61080 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube2d1P61080 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube2d1P61080 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ube2d1P61080 AC151971.4-201ENSMUST00000214717 704 ntBASIC14.21□□□□□ -0.13
Ube2d1P61080 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Ube2d1P61080 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Ube2d1P61080 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ube2d1P61080 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube2d1P61080 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ube2d1P61080 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Ube2d1P61080 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ube2d1P61080 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2d1P61080 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2d1P61080 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2d1P61080 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2d1P61080 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2d1P61080 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2d1P61080 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2d1P61080 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ube2d1P61080 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2d1P61080 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ube2d1P61080 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ube2d1P61080 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ube2d1P61080 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube2d1P61080 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ube2d1P61080 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube2d1P61080 Gm5131-201ENSMUST00000212776 1238 ntBASIC14.19□□□□□ -0.14
Ube2d1P61080 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.19□□□□□ -0.14
Ube2d1P61080 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ube2d1P61080 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC14.19□□□□□ -0.14
Ube2d1P61080 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Ube2d1P61080 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2d1P61080 Hsf1-204ENSMUST00000226872 2104 ntBASIC14.18□□□□□ -0.14
Ube2d1P61080 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2d1P61080 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2d1P61080 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2d1P61080 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2d1P61080 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2d1P61080 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ube2d1P61080 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC14.18□□□□□ -0.14
Ube2d1P61080 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ube2d1P61080 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ube2d1P61080 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2d1P61080 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2d1P61080 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2d1P61080 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ube2d1P61080 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ube2d1P61080 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube2d1P61080 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ube2d1P61080 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Ube2d1P61080 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC14.17□□□□□ -0.14
Ube2d1P61080 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ube2d1P61080 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ube2d1P61080 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms