Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.57■□□□□ 0.72
P04213 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.57■□□□□ 0.72
P04213 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
P04213 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.56■□□□□ 0.72
P04213 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
P04213 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
P04213 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
P04213 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
P04213 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
P04213 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.56■□□□□ 0.72
P04213 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
P04213 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
P04213 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
P04213 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
P04213 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.56■□□□□ 0.72
P04213 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
P04213 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
P04213 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
P04213 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
P04213 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
P04213 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
P04213 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.55■□□□□ 0.72
P04213 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
P04213 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
P04213 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.55■□□□□ 0.72
P04213 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
P04213 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.55■□□□□ 0.72
P04213 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
P04213 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
P04213 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
P04213 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
P04213 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.54■□□□□ 0.72
P04213 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
P04213 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.54■□□□□ 0.72
P04213 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
P04213 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
P04213 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
P04213 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
P04213 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
P04213 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
P04213 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.53■□□□□ 0.72
P04213 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
P04213 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
P04213 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
P04213 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
P04213 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
P04213 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
P04213 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
P04213 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.52■□□□□ 0.72
P04213 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.52■□□□□ 0.72
P04213 Gm40881-201ENSMUST00000223397 166 ntBASIC19.52■□□□□ 0.72
P04213 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
P04213 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
P04213 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
P04213 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
P04213 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
P04213 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
P04213 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
P04213 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
P04213 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
P04213 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
P04213 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
P04213 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
P04213 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
P04213 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.51■□□□□ 0.71
P04213 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
P04213 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
P04213 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.51■□□□□ 0.71
P04213 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
P04213 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
P04213 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
P04213 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.49■□□□□ 0.71
P04213 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
P04213 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
P04213 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
P04213 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.49■□□□□ 0.71
P04213 Gm15820-201ENSMUST00000201566 728 ntBASIC19.49■□□□□ 0.71
P04213 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
P04213 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
P04213 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.49■□□□□ 0.71
P04213 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
P04213 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
P04213 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
P04213 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
P04213 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
P04213 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
P04213 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.48■□□□□ 0.71
P04213 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.48■□□□□ 0.71
P04213 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.48■□□□□ 0.71
P04213 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
P04213 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
P04213 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
P04213 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
P04213 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
P04213 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
P04213 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
P04213 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.47■□□□□ 0.71
P04213 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.47■□□□□ 0.71
P04213 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.47■□□□□ 0.71
P04213 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms