Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Gm7977-201ENSMUST00000193787 748 ntBASIC19.03■□□□□ 0.64
Tnfrsf17O88472 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
Tnfrsf17O88472 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.03■□□□□ 0.64
Tnfrsf17O88472 Gm4968-201ENSMUST00000071458 858 ntBASIC19.03■□□□□ 0.64
Tnfrsf17O88472 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfrsf17O88472 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfrsf17O88472 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfrsf17O88472 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfrsf17O88472 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfrsf17O88472 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfrsf17O88472 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tnfrsf17O88472 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Tnfrsf17O88472 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfrsf17O88472 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfrsf17O88472 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Tnfrsf17O88472 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
Tnfrsf17O88472 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.02■□□□□ 0.64
Tnfrsf17O88472 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfrsf17O88472 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfrsf17O88472 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.02■□□□□ 0.64
Tnfrsf17O88472 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tnfrsf17O88472 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tnfrsf17O88472 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.63
Tnfrsf17O88472 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tnfrsf17O88472 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Tnfrsf17O88472 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tnfrsf17O88472 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf17O88472 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf17O88472 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.01■□□□□ 0.63
Tnfrsf17O88472 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.01■□□□□ 0.63
Tnfrsf17O88472 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf17O88472 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.01■□□□□ 0.63
Tnfrsf17O88472 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tnfrsf17O88472 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf17O88472 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19■□□□□ 0.63
Tnfrsf17O88472 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf17O88472 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Tnfrsf17O88472 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19■□□□□ 0.63
Tnfrsf17O88472 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf17O88472 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19■□□□□ 0.63
Tnfrsf17O88472 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf17O88472 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf17O88472 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf17O88472 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tnfrsf17O88472 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf17O88472 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf17O88472 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.99■□□□□ 0.63
Tnfrsf17O88472 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Tnfrsf17O88472 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.99■□□□□ 0.63
Tnfrsf17O88472 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
Tnfrsf17O88472 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Tnfrsf17O88472 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf17O88472 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf17O88472 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf17O88472 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tnfrsf17O88472 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfrsf17O88472 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfrsf17O88472 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfrsf17O88472 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfrsf17O88472 Gm12527-201ENSMUST00000117967 564 ntBASIC18.98■□□□□ 0.63
Tnfrsf17O88472 Gm13234-201ENSMUST00000120010 747 ntBASIC18.98■□□□□ 0.63
Tnfrsf17O88472 Mir5133-201ENSMUST00000174955 77 ntBASIC18.98■□□□□ 0.63
Tnfrsf17O88472 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.98■□□□□ 0.63
Tnfrsf17O88472 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfrsf17O88472 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfrsf17O88472 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.98■□□□□ 0.63
Tnfrsf17O88472 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tnfrsf17O88472 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfrsf17O88472 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfrsf17O88472 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.97■□□□□ 0.63
Tnfrsf17O88472 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.97■□□□□ 0.63
Tnfrsf17O88472 Gm27801-201ENSMUST00000184174 223 ntBASIC18.97■□□□□ 0.63
Tnfrsf17O88472 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfrsf17O88472 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfrsf17O88472 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
Tnfrsf17O88472 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfrsf17O88472 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Tnfrsf17O88472 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tnfrsf17O88472 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf17O88472 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Tnfrsf17O88472 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Tnfrsf17O88472 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf17O88472 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf17O88472 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Tnfrsf17O88472 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Tnfrsf17O88472 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf17O88472 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf17O88472 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf17O88472 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tnfrsf17O88472 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Tnfrsf17O88472 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tnfrsf17O88472 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.95■□□□□ 0.62
Tnfrsf17O88472 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf17O88472 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf17O88472 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf17O88472 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.94■□□□□ 0.62
Tnfrsf17O88472 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.94■□□□□ 0.62
Tnfrsf17O88472 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf17O88472 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tnfrsf17O88472 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms