Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gfra3O35118 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gfra3O35118 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gfra3O35118 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gfra3O35118 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gfra3O35118 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gfra3O35118 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.54■□□□□ 0.4
Gfra3O35118 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gfra3O35118 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gfra3O35118 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gfra3O35118 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.54■□□□□ 0.4
Gfra3O35118 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gfra3O35118 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gfra3O35118 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.54■□□□□ 0.4
Gfra3O35118 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gfra3O35118 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gfra3O35118 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gfra3O35118 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gfra3O35118 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gfra3O35118 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gfra3O35118 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gfra3O35118 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gfra3O35118 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gfra3O35118 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gfra3O35118 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Gfra3O35118 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.53■□□□□ 0.4
Gfra3O35118 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gfra3O35118 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gfra3O35118 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gfra3O35118 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gfra3O35118 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gfra3O35118 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Gfra3O35118 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gfra3O35118 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Gfra3O35118 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.52■□□□□ 0.4
Gfra3O35118 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gfra3O35118 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gfra3O35118 Gm45417-201ENSMUST00000209533 758 ntBASIC17.52■□□□□ 0.4
Gfra3O35118 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gfra3O35118 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gfra3O35118 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gfra3O35118 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gfra3O35118 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Gfra3O35118 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Gfra3O35118 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.52■□□□□ 0.39
Gfra3O35118 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gfra3O35118 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Gfra3O35118 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gfra3O35118 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Gfra3O35118 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.51■□□□□ 0.39
Gfra3O35118 Gm43530-201ENSMUST00000195920 274 ntBASIC17.51■□□□□ 0.39
Gfra3O35118 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Gfra3O35118 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Gfra3O35118 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gfra3O35118 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Gfra3O35118 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gfra3O35118 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gfra3O35118 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Gfra3O35118 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gfra3O35118 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gfra3O35118 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gfra3O35118 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Gfra3O35118 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.5■□□□□ 0.39
Gfra3O35118 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gfra3O35118 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gfra3O35118 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gfra3O35118 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gfra3O35118 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gfra3O35118 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gfra3O35118 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gfra3O35118 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gfra3O35118 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gfra3O35118 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Gfra3O35118 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Gfra3O35118 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Gfra3O35118 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Gfra3O35118 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gfra3O35118 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gfra3O35118 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gfra3O35118 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gfra3O35118 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Gfra3O35118 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gfra3O35118 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.48■□□□□ 0.39
Gfra3O35118 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gfra3O35118 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Gfra3O35118 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.48■□□□□ 0.39
Gfra3O35118 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Gfra3O35118 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Gfra3O35118 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.47■□□□□ 0.39
Gfra3O35118 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gfra3O35118 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.47■□□□□ 0.39
Gfra3O35118 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gfra3O35118 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gfra3O35118 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gfra3O35118 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gfra3O35118 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gfra3O35118 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Gfra3O35118 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gfra3O35118 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Gfra3O35118 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms