Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.14■□□□□ 0.49
Raet1cO08604 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Raet1cO08604 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.13■□□□□ 0.49
Raet1cO08604 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Raet1cO08604 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Raet1cO08604 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Raet1cO08604 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Raet1cO08604 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Raet1cO08604 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Raet1cO08604 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Raet1cO08604 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Raet1cO08604 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Raet1cO08604 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Raet1cO08604 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Raet1cO08604 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.13■□□□□ 0.49
Raet1cO08604 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Raet1cO08604 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Raet1cO08604 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Raet1cO08604 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Raet1cO08604 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Raet1cO08604 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Raet1cO08604 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Raet1cO08604 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Raet1cO08604 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Raet1cO08604 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Raet1cO08604 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Raet1cO08604 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.11■□□□□ 0.49
Raet1cO08604 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Raet1cO08604 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Raet1cO08604 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.11■□□□□ 0.49
Raet1cO08604 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Raet1cO08604 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Raet1cO08604 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Raet1cO08604 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Raet1cO08604 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Raet1cO08604 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Raet1cO08604 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Raet1cO08604 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Raet1cO08604 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Raet1cO08604 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Raet1cO08604 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.1■□□□□ 0.49
Raet1cO08604 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Raet1cO08604 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.09■□□□□ 0.49
Raet1cO08604 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Raet1cO08604 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Raet1cO08604 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Raet1cO08604 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Raet1cO08604 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Raet1cO08604 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Raet1cO08604 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Raet1cO08604 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Raet1cO08604 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Raet1cO08604 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
Raet1cO08604 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Raet1cO08604 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Raet1cO08604 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Raet1cO08604 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Raet1cO08604 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Raet1cO08604 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Raet1cO08604 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Raet1cO08604 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Raet1cO08604 Etf1-202ENSMUST00000180351 108 ntBASIC18.08■□□□□ 0.48
Raet1cO08604 Gm7417-201ENSMUST00000192950 473 ntBASIC18.08■□□□□ 0.48
Raet1cO08604 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Raet1cO08604 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
Raet1cO08604 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Raet1cO08604 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Raet1cO08604 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.07■□□□□ 0.48
Raet1cO08604 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.07■□□□□ 0.48
Raet1cO08604 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.07■□□□□ 0.48
Raet1cO08604 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Raet1cO08604 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Raet1cO08604 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Raet1cO08604 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Raet1cO08604 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Raet1cO08604 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Raet1cO08604 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Raet1cO08604 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Raet1cO08604 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Raet1cO08604 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Raet1cO08604 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Raet1cO08604 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Raet1cO08604 Gm9959-201ENSMUST00000068277 390 ntBASIC18.06■□□□□ 0.48
Raet1cO08604 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Raet1cO08604 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Raet1cO08604 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Raet1cO08604 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Raet1cO08604 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Raet1cO08604 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Raet1cO08604 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Raet1cO08604 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Raet1cO08604 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Raet1cO08604 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Raet1cO08604 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Raet1cO08604 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Raet1cO08604 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Raet1cO08604 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Raet1cO08604 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Raet1cO08604 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Raet1cO08604 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms