Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trbc1A0A0A6YWV4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trbc1A0A0A6YWV4 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.64■□□□□ 0.57
Trbc1A0A0A6YWV4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trbc1A0A0A6YWV4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbc1A0A0A6YWV4 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbc1A0A0A6YWV4 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trbc1A0A0A6YWV4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Trbc1A0A0A6YWV4 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbc1A0A0A6YWV4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbc1A0A0A6YWV4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trbc1A0A0A6YWV4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Trbc1A0A0A6YWV4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.62■□□□□ 0.57
Trbc1A0A0A6YWV4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.62■□□□□ 0.57
Trbc1A0A0A6YWV4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.62■□□□□ 0.57
Trbc1A0A0A6YWV4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.62■□□□□ 0.57
Trbc1A0A0A6YWV4 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbc1A0A0A6YWV4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trbc1A0A0A6YWV4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trbc1A0A0A6YWV4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbc1A0A0A6YWV4 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trbc1A0A0A6YWV4 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbc1A0A0A6YWV4 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Trbc1A0A0A6YWV4 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.61■□□□□ 0.57
Trbc1A0A0A6YWV4 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbc1A0A0A6YWV4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbc1A0A0A6YWV4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbc1A0A0A6YWV4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trbc1A0A0A6YWV4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbc1A0A0A6YWV4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbc1A0A0A6YWV4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trbc1A0A0A6YWV4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbc1A0A0A6YWV4 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbc1A0A0A6YWV4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.59■□□□□ 0.57
Trbc1A0A0A6YWV4 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbc1A0A0A6YWV4 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trbc1A0A0A6YWV4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Trbc1A0A0A6YWV4 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbc1A0A0A6YWV4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbc1A0A0A6YWV4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Trbc1A0A0A6YWV4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trbc1A0A0A6YWV4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Trbc1A0A0A6YWV4 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbc1A0A0A6YWV4 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trbc1A0A0A6YWV4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Trbc1A0A0A6YWV4 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trbc1A0A0A6YWV4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trbc1A0A0A6YWV4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trbc1A0A0A6YWV4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trbc1A0A0A6YWV4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trbc1A0A0A6YWV4 Gm12922-201ENSMUST00000120626 809 ntBASIC18.58■□□□□ 0.56
Trbc1A0A0A6YWV4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.58■□□□□ 0.56
Trbc1A0A0A6YWV4 Gm9870-201ENSMUST00000063874 645 ntBASIC18.58■□□□□ 0.56
Trbc1A0A0A6YWV4 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trbc1A0A0A6YWV4 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.58■□□□□ 0.56
Trbc1A0A0A6YWV4 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.58■□□□□ 0.56
Trbc1A0A0A6YWV4 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.57■□□□□ 0.56
Trbc1A0A0A6YWV4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbc1A0A0A6YWV4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trbc1A0A0A6YWV4 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbc1A0A0A6YWV4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbc1A0A0A6YWV4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbc1A0A0A6YWV4 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbc1A0A0A6YWV4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Trbc1A0A0A6YWV4 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.57■□□□□ 0.56
Trbc1A0A0A6YWV4 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trbc1A0A0A6YWV4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbc1A0A0A6YWV4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbc1A0A0A6YWV4 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trbc1A0A0A6YWV4 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Trbc1A0A0A6YWV4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Trbc1A0A0A6YWV4 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trbc1A0A0A6YWV4 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trbc1A0A0A6YWV4 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbc1A0A0A6YWV4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Trbc1A0A0A6YWV4 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbc1A0A0A6YWV4 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.56■□□□□ 0.56
Trbc1A0A0A6YWV4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbc1A0A0A6YWV4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Trbc1A0A0A6YWV4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trbc1A0A0A6YWV4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Trbc1A0A0A6YWV4 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.56■□□□□ 0.56
Trbc1A0A0A6YWV4 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbc1A0A0A6YWV4 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.55■□□□□ 0.56
Trbc1A0A0A6YWV4 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trbc1A0A0A6YWV4 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.55■□□□□ 0.56
Trbc1A0A0A6YWV4 Gm7143-201ENSMUST00000222811 859 ntBASIC18.55■□□□□ 0.56
Trbc1A0A0A6YWV4 Gm9847-201ENSMUST00000052528 599 ntBASIC18.55■□□□□ 0.56
Trbc1A0A0A6YWV4 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trbc1A0A0A6YWV4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbc1A0A0A6YWV4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbc1A0A0A6YWV4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.54■□□□□ 0.56
Trbc1A0A0A6YWV4 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trbc1A0A0A6YWV4 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.54■□□□□ 0.56
Trbc1A0A0A6YWV4 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbc1A0A0A6YWV4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trbc1A0A0A6YWV4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbc1A0A0A6YWV4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbc1A0A0A6YWV4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trbc1A0A0A6YWV4 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms