Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav16A0A075B653 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav16A0A075B653 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav16A0A075B653 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav16A0A075B653 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC15.63■□□□□ 0.09
Trav16A0A075B653 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav16A0A075B653 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav16A0A075B653 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav16A0A075B653 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav16A0A075B653 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav16A0A075B653 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav16A0A075B653 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav16A0A075B653 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trav16A0A075B653 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav16A0A075B653 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC15.62■□□□□ 0.09
Trav16A0A075B653 AC158990.1-201ENSMUST00000221450 2016 ntBASIC15.62■□□□□ 0.09
Trav16A0A075B653 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav16A0A075B653 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trav16A0A075B653 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav16A0A075B653 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav16A0A075B653 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav16A0A075B653 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav16A0A075B653 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav16A0A075B653 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav16A0A075B653 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav16A0A075B653 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav16A0A075B653 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.61■□□□□ 0.09
Trav16A0A075B653 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav16A0A075B653 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav16A0A075B653 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav16A0A075B653 Gm11687-201ENSMUST00000118911 886 ntBASIC15.61■□□□□ 0.09
Trav16A0A075B653 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav16A0A075B653 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav16A0A075B653 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav16A0A075B653 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav16A0A075B653 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav16A0A075B653 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav16A0A075B653 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav16A0A075B653 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav16A0A075B653 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav16A0A075B653 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav16A0A075B653 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC15.6■□□□□ 0.09
Trav16A0A075B653 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav16A0A075B653 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav16A0A075B653 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav16A0A075B653 AC152827.1-201ENSMUST00000221143 2189 ntBASIC15.6■□□□□ 0.09
Trav16A0A075B653 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav16A0A075B653 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav16A0A075B653 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav16A0A075B653 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav16A0A075B653 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav16A0A075B653 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav16A0A075B653 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trav16A0A075B653 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav16A0A075B653 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav16A0A075B653 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav16A0A075B653 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Trav16A0A075B653 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav16A0A075B653 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav16A0A075B653 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trav16A0A075B653 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav16A0A075B653 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav16A0A075B653 AC151971.4-201ENSMUST00000214717 704 ntBASIC15.58■□□□□ 0.08
Trav16A0A075B653 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav16A0A075B653 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav16A0A075B653 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Trav16A0A075B653 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav16A0A075B653 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav16A0A075B653 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav16A0A075B653 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav16A0A075B653 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav16A0A075B653 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Trav16A0A075B653 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav16A0A075B653 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav16A0A075B653 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Trav16A0A075B653 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav16A0A075B653 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trav16A0A075B653 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.57■□□□□ 0.08
Trav16A0A075B653 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav16A0A075B653 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav16A0A075B653 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav16A0A075B653 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Trav16A0A075B653 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav16A0A075B653 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav16A0A075B653 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav16A0A075B653 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Trav16A0A075B653 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trav16A0A075B653 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trav16A0A075B653 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav16A0A075B653 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav16A0A075B653 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav16A0A075B653 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav16A0A075B653 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav16A0A075B653 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trav16A0A075B653 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav16A0A075B653 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav16A0A075B653 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav16A0A075B653 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav16A0A075B653 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav16A0A075B653 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms