Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Gm15617-201ENSMUST00000118973 771 ntBASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Gm11340-201ENSMUST00000119226 412 ntBASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Gm23218-201ENSMUST00000158124 276 ntBASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Gm42655-201ENSMUST00000202782 1134 ntBASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Gm18514-201ENSMUST00000218980 436 ntBASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Gm18968-201ENSMUST00000221319 862 ntBASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sh3rf2Q8BZT2 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Sh3rf2Q8BZT2 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sh3rf2Q8BZT2 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Sh3rf2Q8BZT2 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Sh3rf2Q8BZT2 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sh3rf2Q8BZT2 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sh3rf2Q8BZT2 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sh3rf2Q8BZT2 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sh3rf2Q8BZT2 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Sh3rf2Q8BZT2 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sh3rf2Q8BZT2 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sh3rf2Q8BZT2 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Sh3rf2Q8BZT2 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sh3rf2Q8BZT2 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Sh3rf2Q8BZT2 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms